Protein–RNA interactions for Protein: Q8CBR6

Tsku, Tsukushin, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TskuQ8CBR6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TskuQ8CBR6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TskuQ8CBR6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TskuQ8CBR6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TskuQ8CBR6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TskuQ8CBR6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TskuQ8CBR6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TskuQ8CBR6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TskuQ8CBR6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TskuQ8CBR6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TskuQ8CBR6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TskuQ8CBR6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TskuQ8CBR6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.08■■□□□ 1.13
TskuQ8CBR6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.07■■□□□ 1.12
TskuQ8CBR6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TskuQ8CBR6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TskuQ8CBR6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TskuQ8CBR6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TskuQ8CBR6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TskuQ8CBR6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TskuQ8CBR6 Gm16148-201ENSMUST00000119653 893 ntBASIC21.99■■□□□ 1.11
TskuQ8CBR6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TskuQ8CBR6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.97■■□□□ 1.11
TskuQ8CBR6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TskuQ8CBR6 Zfp131-205ENSMUST00000223812 663 ntBASIC21.97■■□□□ 1.11
TskuQ8CBR6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TskuQ8CBR6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.95■■□□□ 1.1
TskuQ8CBR6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TskuQ8CBR6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TskuQ8CBR6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
TskuQ8CBR6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TskuQ8CBR6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TskuQ8CBR6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TskuQ8CBR6 Peli2-204ENSMUST00000226513 1320 ntBASIC21.93■■□□□ 1.1
TskuQ8CBR6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TskuQ8CBR6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TskuQ8CBR6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TskuQ8CBR6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TskuQ8CBR6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TskuQ8CBR6 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.86■■□□□ 1.09
TskuQ8CBR6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
TskuQ8CBR6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TskuQ8CBR6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TskuQ8CBR6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TskuQ8CBR6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TskuQ8CBR6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TskuQ8CBR6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TskuQ8CBR6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TskuQ8CBR6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.8■■□□□ 1.08
TskuQ8CBR6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TskuQ8CBR6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TskuQ8CBR6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.77■■□□□ 1.08
TskuQ8CBR6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TskuQ8CBR6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.74■■□□□ 1.07
TskuQ8CBR6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TskuQ8CBR6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TskuQ8CBR6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.72■■□□□ 1.07
TskuQ8CBR6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TskuQ8CBR6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TskuQ8CBR6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TskuQ8CBR6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TskuQ8CBR6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TskuQ8CBR6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TskuQ8CBR6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.66■■□□□ 1.06
TskuQ8CBR6 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.65■■□□□ 1.06
TskuQ8CBR6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TskuQ8CBR6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TskuQ8CBR6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TskuQ8CBR6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.64■■□□□ 1.05
TskuQ8CBR6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TskuQ8CBR6 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.64■■□□□ 1.05
TskuQ8CBR6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TskuQ8CBR6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TskuQ8CBR6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TskuQ8CBR6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TskuQ8CBR6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TskuQ8CBR6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TskuQ8CBR6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TskuQ8CBR6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TskuQ8CBR6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TskuQ8CBR6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TskuQ8CBR6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TskuQ8CBR6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.56■■□□□ 1.04
TskuQ8CBR6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TskuQ8CBR6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TskuQ8CBR6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TskuQ8CBR6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TskuQ8CBR6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TskuQ8CBR6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TskuQ8CBR6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TskuQ8CBR6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TskuQ8CBR6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.5■■□□□ 1.03
TskuQ8CBR6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TskuQ8CBR6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.49■■□□□ 1.03
TskuQ8CBR6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TskuQ8CBR6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.46■■□□□ 1.03
TskuQ8CBR6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TskuQ8CBR6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TskuQ8CBR6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TskuQ8CBR6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms