Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf170Q8CBG9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf170Q8CBG9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf170Q8CBG9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf170Q8CBG9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf170Q8CBG9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf170Q8CBG9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Rnf170Q8CBG9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf170Q8CBG9 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Gm27322-201ENSMUST00000184007 104 ntBASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf170Q8CBG9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rnf170Q8CBG9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf170Q8CBG9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf170Q8CBG9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf170Q8CBG9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf170Q8CBG9 Mipep-204ENSMUST00000225043 1548 ntBASIC21.65■■□□□ 1.06
Rnf170Q8CBG9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf170Q8CBG9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf170Q8CBG9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf170Q8CBG9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf170Q8CBG9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf170Q8CBG9 Gm26115-201ENSMUST00000175605 87 ntBASIC21.61■■□□□ 1.05
Rnf170Q8CBG9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf170Q8CBG9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf170Q8CBG9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Rnf170Q8CBG9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf170Q8CBG9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf170Q8CBG9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rnf170Q8CBG9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf170Q8CBG9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf170Q8CBG9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf170Q8CBG9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.55■■□□□ 1.04
Rnf170Q8CBG9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf170Q8CBG9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf170Q8CBG9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf170Q8CBG9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.53■■□□□ 1.04
Rnf170Q8CBG9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf170Q8CBG9 Gm8109-201ENSMUST00000194076 746 ntBASIC21.52■■□□□ 1.04
Rnf170Q8CBG9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf170Q8CBG9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.5■■□□□ 1.03
Rnf170Q8CBG9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.5■■□□□ 1.03
Rnf170Q8CBG9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.48■■□□□ 1.03
Rnf170Q8CBG9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rnf170Q8CBG9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rnf170Q8CBG9 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.41■■□□□ 1.02
Rnf170Q8CBG9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf170Q8CBG9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf170Q8CBG9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf170Q8CBG9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf170Q8CBG9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf170Q8CBG9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf170Q8CBG9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf170Q8CBG9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf170Q8CBG9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf170Q8CBG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf170Q8CBG9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rnf170Q8CBG9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf170Q8CBG9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf170Q8CBG9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf170Q8CBG9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnf170Q8CBG9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf170Q8CBG9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf170Q8CBG9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf170Q8CBG9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf170Q8CBG9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf170Q8CBG9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf170Q8CBG9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf170Q8CBG9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf170Q8CBG9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf170Q8CBG9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf170Q8CBG9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.25■□□□□ 0.99
Rnf170Q8CBG9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf170Q8CBG9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf170Q8CBG9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf170Q8CBG9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf170Q8CBG9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf170Q8CBG9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.21■□□□□ 0.99
Rnf170Q8CBG9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf170Q8CBG9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf170Q8CBG9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Rnf170Q8CBG9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf170Q8CBG9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf170Q8CBG9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf170Q8CBG9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
Rnf170Q8CBG9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf170Q8CBG9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf170Q8CBG9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf170Q8CBG9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf170Q8CBG9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf170Q8CBG9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf170Q8CBG9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf170Q8CBG9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf170Q8CBG9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf170Q8CBG9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf170Q8CBG9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rnf170Q8CBG9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms