Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd9Q8BYH8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chd9Q8BYH8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Chd9Q8BYH8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chd9Q8BYH8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Chd9Q8BYH8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd9Q8BYH8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chd9Q8BYH8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd9Q8BYH8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Chd9Q8BYH8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd9Q8BYH8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd9Q8BYH8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd9Q8BYH8 Gm8503-201ENSMUST00000118131 455 ntBASIC21.68■■□□□ 1.06
Chd9Q8BYH8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.67■■□□□ 1.06
Chd9Q8BYH8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd9Q8BYH8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd9Q8BYH8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd9Q8BYH8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.64■■□□□ 1.05
Chd9Q8BYH8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd9Q8BYH8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd9Q8BYH8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd9Q8BYH8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd9Q8BYH8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd9Q8BYH8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd9Q8BYH8 Gm9397-201ENSMUST00000200125 605 ntBASIC21.61■■□□□ 1.05
Chd9Q8BYH8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd9Q8BYH8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd9Q8BYH8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd9Q8BYH8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.53■■□□□ 1.04
Chd9Q8BYH8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.52■■□□□ 1.04
Chd9Q8BYH8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chd9Q8BYH8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chd9Q8BYH8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Chd9Q8BYH8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chd9Q8BYH8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chd9Q8BYH8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chd9Q8BYH8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chd9Q8BYH8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chd9Q8BYH8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.44■■□□□ 1.02
Chd9Q8BYH8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chd9Q8BYH8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.42■■□□□ 1.02
Chd9Q8BYH8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chd9Q8BYH8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.4■■□□□ 1.02
Chd9Q8BYH8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Chd9Q8BYH8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chd9Q8BYH8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.38■■□□□ 1.01
Chd9Q8BYH8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chd9Q8BYH8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chd9Q8BYH8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.36■■□□□ 1.01
Chd9Q8BYH8 Gm6821-201ENSMUST00000107540 542 ntBASIC21.29■■□□□ 1
Chd9Q8BYH8 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.26■□□□□ 0.99
Chd9Q8BYH8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Chd9Q8BYH8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd9Q8BYH8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.25■□□□□ 0.99
Chd9Q8BYH8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd9Q8BYH8 Peli2-204ENSMUST00000226513 1320 ntBASIC21.24■□□□□ 0.99
Chd9Q8BYH8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd9Q8BYH8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd9Q8BYH8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd9Q8BYH8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd9Q8BYH8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.21■□□□□ 0.99
Chd9Q8BYH8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chd9Q8BYH8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.21■□□□□ 0.99
Chd9Q8BYH8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd9Q8BYH8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd9Q8BYH8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Chd9Q8BYH8 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.18■□□□□ 0.98
Chd9Q8BYH8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd9Q8BYH8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.18■□□□□ 0.98
Chd9Q8BYH8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd9Q8BYH8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Gm24970-201ENSMUST00000175582 82 ntBASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd9Q8BYH8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd9Q8BYH8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd9Q8BYH8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.09■□□□□ 0.97
Chd9Q8BYH8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd9Q8BYH8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd9Q8BYH8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd9Q8BYH8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd9Q8BYH8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd9Q8BYH8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.04■□□□□ 0.96
Chd9Q8BYH8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd9Q8BYH8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd9Q8BYH8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd9Q8BYH8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd9Q8BYH8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chd9Q8BYH8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.99■□□□□ 0.95
Chd9Q8BYH8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chd9Q8BYH8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.96■□□□□ 0.95
Chd9Q8BYH8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.93■□□□□ 0.94
Chd9Q8BYH8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.93■□□□□ 0.94
Chd9Q8BYH8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chd9Q8BYH8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.91■□□□□ 0.94
Chd9Q8BYH8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Chd9Q8BYH8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd9Q8BYH8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms