Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Zcchc3Q8BPK2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.53■■□□□ 1.52
Zcchc3Q8BPK2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Zcchc3Q8BPK2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
Zcchc3Q8BPK2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Zcchc3Q8BPK2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Zcchc3Q8BPK2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.49■■□□□ 1.51
Zcchc3Q8BPK2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zcchc3Q8BPK2 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.45■■□□□ 1.5
Zcchc3Q8BPK2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zcchc3Q8BPK2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zcchc3Q8BPK2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Zcchc3Q8BPK2 Gm26115-201ENSMUST00000175605 87 ntBASIC24.37■■□□□ 1.49
Zcchc3Q8BPK2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zcchc3Q8BPK2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Zcchc3Q8BPK2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.34■■□□□ 1.49
Zcchc3Q8BPK2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc3Q8BPK2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc3Q8BPK2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc3Q8BPK2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zcchc3Q8BPK2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zcchc3Q8BPK2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Zcchc3Q8BPK2 Gm8109-201ENSMUST00000194076 746 ntBASIC24.31■■□□□ 1.48
Zcchc3Q8BPK2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zcchc3Q8BPK2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zcchc3Q8BPK2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Zcchc3Q8BPK2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Zcchc3Q8BPK2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Zcchc3Q8BPK2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
Zcchc3Q8BPK2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Zcchc3Q8BPK2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zcchc3Q8BPK2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.23■■□□□ 1.47
Zcchc3Q8BPK2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zcchc3Q8BPK2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Zcchc3Q8BPK2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.19■■□□□ 1.46
Zcchc3Q8BPK2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Zcchc3Q8BPK2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Zcchc3Q8BPK2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Zcchc3Q8BPK2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zcchc3Q8BPK2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc3Q8BPK2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc3Q8BPK2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Zcchc3Q8BPK2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Zcchc3Q8BPK2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Zcchc3Q8BPK2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Zcchc3Q8BPK2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
Zcchc3Q8BPK2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.11■■□□□ 1.45
Zcchc3Q8BPK2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zcchc3Q8BPK2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.1■■□□□ 1.45
Zcchc3Q8BPK2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Zcchc3Q8BPK2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Zcchc3Q8BPK2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Zcchc3Q8BPK2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Zcchc3Q8BPK2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Zcchc3Q8BPK2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Zcchc3Q8BPK2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Zcchc3Q8BPK2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Zcchc3Q8BPK2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zcchc3Q8BPK2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Zcchc3Q8BPK2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Zcchc3Q8BPK2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Zcchc3Q8BPK2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zcchc3Q8BPK2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Zcchc3Q8BPK2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zcchc3Q8BPK2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zcchc3Q8BPK2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.97■■□□□ 1.43
Zcchc3Q8BPK2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Zcchc3Q8BPK2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Zcchc3Q8BPK2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zcchc3Q8BPK2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zcchc3Q8BPK2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zcchc3Q8BPK2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zcchc3Q8BPK2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zcchc3Q8BPK2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Zcchc3Q8BPK2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zcchc3Q8BPK2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zcchc3Q8BPK2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Zcchc3Q8BPK2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Zcchc3Q8BPK2 Peli2-204ENSMUST00000226513 1320 ntBASIC23.88■■□□□ 1.41
Zcchc3Q8BPK2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.88■■□□□ 1.41
Zcchc3Q8BPK2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Zcchc3Q8BPK2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Zcchc3Q8BPK2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Zcchc3Q8BPK2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.86■■□□□ 1.41
Zcchc3Q8BPK2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.86■■□□□ 1.41
Zcchc3Q8BPK2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Zcchc3Q8BPK2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.85■■□□□ 1.41
Zcchc3Q8BPK2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zcchc3Q8BPK2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Zcchc3Q8BPK2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Zcchc3Q8BPK2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Zcchc3Q8BPK2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Zcchc3Q8BPK2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Zcchc3Q8BPK2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Zcchc3Q8BPK2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Zcchc3Q8BPK2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zcchc3Q8BPK2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zcchc3Q8BPK2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Zcchc3Q8BPK2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Zcchc3Q8BPK2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms