Protein–RNA interactions for Protein: Q8BMJ8

Sp8, Transcription factor Sp8, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp8Q8BMJ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Sp8Q8BMJ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Sp8Q8BMJ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Sp8Q8BMJ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Sp8Q8BMJ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.63■■■□□ 2.65
Sp8Q8BMJ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.63■■■□□ 2.65
Sp8Q8BMJ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.61■■■□□ 2.65
Sp8Q8BMJ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Sp8Q8BMJ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Sp8Q8BMJ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Sp8Q8BMJ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Sp8Q8BMJ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Sp8Q8BMJ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Sp8Q8BMJ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.52■■■□□ 2.64
Sp8Q8BMJ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Sp8Q8BMJ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Sp8Q8BMJ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Sp8Q8BMJ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Sp8Q8BMJ8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Sp8Q8BMJ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Sp8Q8BMJ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Sp8Q8BMJ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Sp8Q8BMJ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Sp8Q8BMJ8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Sp8Q8BMJ8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.37■■■□□ 2.61
Sp8Q8BMJ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.37■■■□□ 2.61
Sp8Q8BMJ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Sp8Q8BMJ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.35■■■□□ 2.61
Sp8Q8BMJ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Sp8Q8BMJ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.33■■■□□ 2.61
Sp8Q8BMJ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.29■■■□□ 2.6
Sp8Q8BMJ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Sp8Q8BMJ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.27■■■□□ 2.6
Sp8Q8BMJ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.26■■■□□ 2.6
Sp8Q8BMJ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Sp8Q8BMJ8 Mipep-204ENSMUST00000225043 1548 ntBASIC31.24■■■□□ 2.59
Sp8Q8BMJ8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Sp8Q8BMJ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Sp8Q8BMJ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Sp8Q8BMJ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Sp8Q8BMJ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Sp8Q8BMJ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Sp8Q8BMJ8 Gm16148-201ENSMUST00000119653 893 ntBASIC31.19■■■□□ 2.58
Sp8Q8BMJ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Sp8Q8BMJ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Sp8Q8BMJ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Sp8Q8BMJ8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Sp8Q8BMJ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Sp8Q8BMJ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.1■■■□□ 2.57
Sp8Q8BMJ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.09■■■□□ 2.57
Sp8Q8BMJ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Sp8Q8BMJ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
Sp8Q8BMJ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Sp8Q8BMJ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Sp8Q8BMJ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Sp8Q8BMJ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Sp8Q8BMJ8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.05■■■□□ 2.56
Sp8Q8BMJ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Sp8Q8BMJ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.04■■■□□ 2.56
Sp8Q8BMJ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.04■■■□□ 2.56
Sp8Q8BMJ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Sp8Q8BMJ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Sp8Q8BMJ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Sp8Q8BMJ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sp8Q8BMJ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sp8Q8BMJ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Sp8Q8BMJ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Sp8Q8BMJ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Sp8Q8BMJ8 Gm45855-201ENSMUST00000212546 880 ntBASIC30.95■■■□□ 2.55
Sp8Q8BMJ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Sp8Q8BMJ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sp8Q8BMJ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Sp8Q8BMJ8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.89■■■□□ 2.54
Sp8Q8BMJ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
Sp8Q8BMJ8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Sp8Q8BMJ8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Sp8Q8BMJ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Sp8Q8BMJ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Sp8Q8BMJ8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sp8Q8BMJ8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Sp8Q8BMJ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Sp8Q8BMJ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Sp8Q8BMJ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Sp8Q8BMJ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Sp8Q8BMJ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Sp8Q8BMJ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Sp8Q8BMJ8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.74■■■□□ 2.51
Sp8Q8BMJ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Sp8Q8BMJ8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sp8Q8BMJ8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
Sp8Q8BMJ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sp8Q8BMJ8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Sp8Q8BMJ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.7■■■□□ 2.51
Sp8Q8BMJ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Sp8Q8BMJ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Sp8Q8BMJ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Sp8Q8BMJ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
Sp8Q8BMJ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sp8Q8BMJ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Sp8Q8BMJ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms