Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC36.23■■■■□ 3.39
Col16a1Q8BLX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Col16a1Q8BLX7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC36.19■■■■□ 3.38
Col16a1Q8BLX7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC36.19■■■■□ 3.38
Col16a1Q8BLX7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC36.19■■■■□ 3.38
Col16a1Q8BLX7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Col16a1Q8BLX7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Col16a1Q8BLX7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC36.12■■■■□ 3.37
Col16a1Q8BLX7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Col16a1Q8BLX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
Col16a1Q8BLX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Col16a1Q8BLX7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC36.07■■■■□ 3.37
Col16a1Q8BLX7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC36.04■■■■□ 3.36
Col16a1Q8BLX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC36.02■■■■□ 3.36
Col16a1Q8BLX7 Mipep-204ENSMUST00000225043 1548 ntBASIC36■■■■□ 3.35
Col16a1Q8BLX7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35.98■■■■□ 3.35
Col16a1Q8BLX7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Col16a1Q8BLX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC35.97■■■■□ 3.35
Col16a1Q8BLX7 Gm45855-201ENSMUST00000212546 880 ntBASIC35.97■■■■□ 3.35
Col16a1Q8BLX7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
Col16a1Q8BLX7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Col16a1Q8BLX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
Col16a1Q8BLX7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
Col16a1Q8BLX7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Col16a1Q8BLX7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Col16a1Q8BLX7 Gm9397-201ENSMUST00000200125 605 ntBASIC35.81■■■■□ 3.32
Col16a1Q8BLX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35.81■■■■□ 3.32
Col16a1Q8BLX7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Col16a1Q8BLX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Col16a1Q8BLX7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Col16a1Q8BLX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Col16a1Q8BLX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
Col16a1Q8BLX7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Col16a1Q8BLX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
Col16a1Q8BLX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Col16a1Q8BLX7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Col16a1Q8BLX7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Col16a1Q8BLX7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Col16a1Q8BLX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Col16a1Q8BLX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Col16a1Q8BLX7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC35.66■■■■□ 3.3
Col16a1Q8BLX7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Col16a1Q8BLX7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Col16a1Q8BLX7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Col16a1Q8BLX7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
Col16a1Q8BLX7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Col16a1Q8BLX7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC35.59■■■■□ 3.29
Col16a1Q8BLX7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Col16a1Q8BLX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
Col16a1Q8BLX7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC35.56■■■■□ 3.28
Col16a1Q8BLX7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
Col16a1Q8BLX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC35.55■■■■□ 3.28
Col16a1Q8BLX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Col16a1Q8BLX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC35.53■■■■□ 3.28
Col16a1Q8BLX7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Col16a1Q8BLX7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Col16a1Q8BLX7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Col16a1Q8BLX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
Col16a1Q8BLX7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC35.47■■■■□ 3.27
Col16a1Q8BLX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC35.47■■■■□ 3.27
Col16a1Q8BLX7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.45■■■■□ 3.27
Col16a1Q8BLX7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Col16a1Q8BLX7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC35.44■■■■□ 3.26
Col16a1Q8BLX7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC35.43■■■■□ 3.26
Col16a1Q8BLX7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC35.43■■■■□ 3.26
Col16a1Q8BLX7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Col16a1Q8BLX7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Col16a1Q8BLX7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Col16a1Q8BLX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Col16a1Q8BLX7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC35.39■■■■□ 3.26
Col16a1Q8BLX7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Col16a1Q8BLX7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Col16a1Q8BLX7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Col16a1Q8BLX7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
Col16a1Q8BLX7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC35.32■■■■□ 3.24
Col16a1Q8BLX7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Col16a1Q8BLX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC35.29■■■■□ 3.24
Col16a1Q8BLX7 Gm5987-201ENSMUST00000196433 1151 ntBASIC35.29■■■■□ 3.24
Col16a1Q8BLX7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Col16a1Q8BLX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
Col16a1Q8BLX7 Gm24970-201ENSMUST00000175582 82 ntBASIC35.25■■■■□ 3.23
Col16a1Q8BLX7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC35.25■■■■□ 3.23
Col16a1Q8BLX7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Col16a1Q8BLX7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Col16a1Q8BLX7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC35.2■■■■□ 3.23
Col16a1Q8BLX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC35.19■■■■□ 3.22
Col16a1Q8BLX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Col16a1Q8BLX7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC35.15■■■■□ 3.22
Col16a1Q8BLX7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC35.13■■■■□ 3.22
Col16a1Q8BLX7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Col16a1Q8BLX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC35.1■■■■□ 3.21
Col16a1Q8BLX7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
Col16a1Q8BLX7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC35.08■■■■□ 3.21
Col16a1Q8BLX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC35.06■■■■□ 3.2
Col16a1Q8BLX7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Col16a1Q8BLX7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC35.03■■■■□ 3.2
Col16a1Q8BLX7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Col16a1Q8BLX7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC34.98■■■■□ 3.19
Col16a1Q8BLX7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
Col16a1Q8BLX7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms