Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Fam53bQ8BGR5 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.23■■□□□ 1.31
Fam53bQ8BGR5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Fam53bQ8BGR5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.23■■□□□ 1.31
Fam53bQ8BGR5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam53bQ8BGR5 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.18■■□□□ 1.3
Fam53bQ8BGR5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam53bQ8BGR5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fam53bQ8BGR5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Fam53bQ8BGR5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fam53bQ8BGR5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Fam53bQ8BGR5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Fam53bQ8BGR5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fam53bQ8BGR5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Fam53bQ8BGR5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Fam53bQ8BGR5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Fam53bQ8BGR5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Fam53bQ8BGR5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Fam53bQ8BGR5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fam53bQ8BGR5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fam53bQ8BGR5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fam53bQ8BGR5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23■■□□□ 1.27
Fam53bQ8BGR5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Fam53bQ8BGR5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.97■■□□□ 1.27
Fam53bQ8BGR5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Fam53bQ8BGR5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Fam53bQ8BGR5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Fam53bQ8BGR5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Fam53bQ8BGR5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Fam53bQ8BGR5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Fam53bQ8BGR5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Fam53bQ8BGR5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Fam53bQ8BGR5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Fam53bQ8BGR5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Fam53bQ8BGR5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Fam53bQ8BGR5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
Fam53bQ8BGR5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Fam53bQ8BGR5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Fam53bQ8BGR5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Fam53bQ8BGR5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Fam53bQ8BGR5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Fam53bQ8BGR5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Fam53bQ8BGR5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Fam53bQ8BGR5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Fam53bQ8BGR5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.84■■□□□ 1.25
Fam53bQ8BGR5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Fam53bQ8BGR5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.82■■□□□ 1.24
Fam53bQ8BGR5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.8■■□□□ 1.24
Fam53bQ8BGR5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Fam53bQ8BGR5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Fam53bQ8BGR5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Fam53bQ8BGR5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.76■■□□□ 1.23
Fam53bQ8BGR5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Fam53bQ8BGR5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Fam53bQ8BGR5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Fam53bQ8BGR5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Fam53bQ8BGR5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Fam53bQ8BGR5 Peli2-204ENSMUST00000226513 1320 ntBASIC22.74■■□□□ 1.23
Fam53bQ8BGR5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Fam53bQ8BGR5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Fam53bQ8BGR5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Fam53bQ8BGR5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.73■■□□□ 1.23
Fam53bQ8BGR5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Fam53bQ8BGR5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.72■■□□□ 1.23
Fam53bQ8BGR5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.72■■□□□ 1.23
Fam53bQ8BGR5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Fam53bQ8BGR5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Fam53bQ8BGR5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Fam53bQ8BGR5 Gm24804-201ENSMUST00000174982 85 ntBASIC22.68■■□□□ 1.22
Fam53bQ8BGR5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Fam53bQ8BGR5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam53bQ8BGR5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Fam53bQ8BGR5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Fam53bQ8BGR5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Fam53bQ8BGR5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Fam53bQ8BGR5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.62■■□□□ 1.21
Fam53bQ8BGR5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Fam53bQ8BGR5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Fam53bQ8BGR5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Fam53bQ8BGR5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Fam53bQ8BGR5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
Fam53bQ8BGR5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Fam53bQ8BGR5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Fam53bQ8BGR5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Fam53bQ8BGR5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.55■■□□□ 1.2
Fam53bQ8BGR5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Fam53bQ8BGR5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
Fam53bQ8BGR5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Fam53bQ8BGR5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Fam53bQ8BGR5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Fam53bQ8BGR5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Fam53bQ8BGR5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.51■■□□□ 1.19
Fam53bQ8BGR5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Fam53bQ8BGR5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Fam53bQ8BGR5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms