Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.56■■■□□ 2.16
Sh3d21Q7TSG5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Sh3d21Q7TSG5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Sh3d21Q7TSG5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Sh3d21Q7TSG5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Sh3d21Q7TSG5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Sh3d21Q7TSG5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Sh3d21Q7TSG5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Sh3d21Q7TSG5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.44■■■□□ 2.14
Sh3d21Q7TSG5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sh3d21Q7TSG5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sh3d21Q7TSG5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sh3d21Q7TSG5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sh3d21Q7TSG5 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.39■■■□□ 2.14
Sh3d21Q7TSG5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Sh3d21Q7TSG5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Sh3d21Q7TSG5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sh3d21Q7TSG5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sh3d21Q7TSG5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sh3d21Q7TSG5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Sh3d21Q7TSG5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Sh3d21Q7TSG5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.27■■■□□ 2.12
Sh3d21Q7TSG5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Sh3d21Q7TSG5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sh3d21Q7TSG5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sh3d21Q7TSG5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sh3d21Q7TSG5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sh3d21Q7TSG5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Sh3d21Q7TSG5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Sh3d21Q7TSG5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Sh3d21Q7TSG5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sh3d21Q7TSG5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sh3d21Q7TSG5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
Sh3d21Q7TSG5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sh3d21Q7TSG5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Sh3d21Q7TSG5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Sh3d21Q7TSG5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sh3d21Q7TSG5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Sh3d21Q7TSG5 Gm24804-201ENSMUST00000174982 85 ntBASIC28.14■■■□□ 2.1
Sh3d21Q7TSG5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Sh3d21Q7TSG5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sh3d21Q7TSG5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Sh3d21Q7TSG5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sh3d21Q7TSG5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sh3d21Q7TSG5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Sh3d21Q7TSG5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.08■■■□□ 2.09
Sh3d21Q7TSG5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.08■■■□□ 2.09
Sh3d21Q7TSG5 Peli2-204ENSMUST00000226513 1320 ntBASIC28.07■■■□□ 2.08
Sh3d21Q7TSG5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sh3d21Q7TSG5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sh3d21Q7TSG5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Sh3d21Q7TSG5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Sh3d21Q7TSG5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sh3d21Q7TSG5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.02■■■□□ 2.08
Sh3d21Q7TSG5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Sh3d21Q7TSG5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Sh3d21Q7TSG5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sh3d21Q7TSG5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Sh3d21Q7TSG5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Sh3d21Q7TSG5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sh3d21Q7TSG5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sh3d21Q7TSG5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sh3d21Q7TSG5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Sh3d21Q7TSG5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sh3d21Q7TSG5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Sh3d21Q7TSG5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sh3d21Q7TSG5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Sh3d21Q7TSG5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sh3d21Q7TSG5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Sh3d21Q7TSG5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.84■■■□□ 2.05
Sh3d21Q7TSG5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sh3d21Q7TSG5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.82■■■□□ 2.04
Sh3d21Q7TSG5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Sh3d21Q7TSG5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Sh3d21Q7TSG5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.81■■■□□ 2.04
Sh3d21Q7TSG5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sh3d21Q7TSG5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.81■■■□□ 2.04
Sh3d21Q7TSG5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sh3d21Q7TSG5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sh3d21Q7TSG5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sh3d21Q7TSG5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.78■■■□□ 2.04
Sh3d21Q7TSG5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Sh3d21Q7TSG5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.78■■■□□ 2.04
Sh3d21Q7TSG5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Sh3d21Q7TSG5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.76■■■□□ 2.04
Sh3d21Q7TSG5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sh3d21Q7TSG5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Sh3d21Q7TSG5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sh3d21Q7TSG5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sh3d21Q7TSG5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.74■■■□□ 2.03
Sh3d21Q7TSG5 Gm16148-201ENSMUST00000119653 893 ntBASIC27.74■■■□□ 2.03
Sh3d21Q7TSG5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Sh3d21Q7TSG5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Sh3d21Q7TSG5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sh3d21Q7TSG5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.72■■■□□ 2.03
Sh3d21Q7TSG5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Sh3d21Q7TSG5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sh3d21Q7TSG5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.72■■■□□ 2.03
Sh3d21Q7TSG5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sh3d21Q7TSG5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms