Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Otub1Q7TQI3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.52■■□□□ 1.52
Otub1Q7TQI3 Gm27322-201ENSMUST00000184007 104 ntBASIC24.5■■□□□ 1.51
Otub1Q7TQI3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Otub1Q7TQI3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Otub1Q7TQI3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Otub1Q7TQI3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.47■■□□□ 1.51
Otub1Q7TQI3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Otub1Q7TQI3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Otub1Q7TQI3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Otub1Q7TQI3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Otub1Q7TQI3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.44■■□□□ 1.5
Otub1Q7TQI3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
Otub1Q7TQI3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Otub1Q7TQI3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Otub1Q7TQI3 Gm8109-201ENSMUST00000194076 746 ntBASIC24.42■■□□□ 1.5
Otub1Q7TQI3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.42■■□□□ 1.5
Otub1Q7TQI3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Otub1Q7TQI3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Otub1Q7TQI3 Gm26115-201ENSMUST00000175605 87 ntBASIC24.39■■□□□ 1.49
Otub1Q7TQI3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.39■■□□□ 1.49
Otub1Q7TQI3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Otub1Q7TQI3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Otub1Q7TQI3 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.35■■□□□ 1.49
Otub1Q7TQI3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Otub1Q7TQI3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Otub1Q7TQI3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Otub1Q7TQI3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Otub1Q7TQI3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Otub1Q7TQI3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Otub1Q7TQI3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Otub1Q7TQI3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Otub1Q7TQI3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Otub1Q7TQI3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Otub1Q7TQI3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Otub1Q7TQI3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Otub1Q7TQI3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Otub1Q7TQI3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Otub1Q7TQI3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Otub1Q7TQI3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.2■■□□□ 1.46
Otub1Q7TQI3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Otub1Q7TQI3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Otub1Q7TQI3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Otub1Q7TQI3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Otub1Q7TQI3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Otub1Q7TQI3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.16■■□□□ 1.46
Otub1Q7TQI3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Otub1Q7TQI3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Otub1Q7TQI3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Otub1Q7TQI3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Otub1Q7TQI3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Otub1Q7TQI3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Otub1Q7TQI3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Otub1Q7TQI3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Otub1Q7TQI3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Otub1Q7TQI3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Otub1Q7TQI3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Otub1Q7TQI3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Otub1Q7TQI3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Otub1Q7TQI3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Otub1Q7TQI3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Otub1Q7TQI3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
Otub1Q7TQI3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Otub1Q7TQI3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Otub1Q7TQI3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.03■■□□□ 1.44
Otub1Q7TQI3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Otub1Q7TQI3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Otub1Q7TQI3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Otub1Q7TQI3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Otub1Q7TQI3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
Otub1Q7TQI3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Otub1Q7TQI3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Otub1Q7TQI3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Otub1Q7TQI3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.98■■□□□ 1.43
Otub1Q7TQI3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Otub1Q7TQI3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Otub1Q7TQI3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Otub1Q7TQI3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Otub1Q7TQI3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Otub1Q7TQI3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Otub1Q7TQI3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Otub1Q7TQI3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Otub1Q7TQI3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Otub1Q7TQI3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Otub1Q7TQI3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Otub1Q7TQI3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.9■■□□□ 1.42
Otub1Q7TQI3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Otub1Q7TQI3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Otub1Q7TQI3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Otub1Q7TQI3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Otub1Q7TQI3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Otub1Q7TQI3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.87■■□□□ 1.41
Otub1Q7TQI3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Otub1Q7TQI3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Otub1Q7TQI3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.84■■□□□ 1.41
Otub1Q7TQI3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Otub1Q7TQI3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Otub1Q7TQI3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Otub1Q7TQI3 Peli2-204ENSMUST00000226513 1320 ntBASIC23.82■■□□□ 1.4
Otub1Q7TQI3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms