Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cox11Q6P8I6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cox11Q6P8I6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cox11Q6P8I6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cox11Q6P8I6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cox11Q6P8I6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cox11Q6P8I6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cox11Q6P8I6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.74■□□□□ 0.59
Cox11Q6P8I6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cox11Q6P8I6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cox11Q6P8I6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cox11Q6P8I6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cox11Q6P8I6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cox11Q6P8I6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Cox11Q6P8I6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.72■□□□□ 0.59
Cox11Q6P8I6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cox11Q6P8I6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cox11Q6P8I6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cox11Q6P8I6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cox11Q6P8I6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cox11Q6P8I6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cox11Q6P8I6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cox11Q6P8I6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cox11Q6P8I6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cox11Q6P8I6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cox11Q6P8I6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cox11Q6P8I6 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.6■□□□□ 0.57
Cox11Q6P8I6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Cox11Q6P8I6 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.58■□□□□ 0.57
Cox11Q6P8I6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cox11Q6P8I6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cox11Q6P8I6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cox11Q6P8I6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.54■□□□□ 0.56
Cox11Q6P8I6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cox11Q6P8I6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cox11Q6P8I6 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.53■□□□□ 0.56
Cox11Q6P8I6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cox11Q6P8I6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cox11Q6P8I6 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.51■□□□□ 0.55
Cox11Q6P8I6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cox11Q6P8I6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cox11Q6P8I6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cox11Q6P8I6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cox11Q6P8I6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Cox11Q6P8I6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cox11Q6P8I6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cox11Q6P8I6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cox11Q6P8I6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cox11Q6P8I6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cox11Q6P8I6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
Cox11Q6P8I6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cox11Q6P8I6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cox11Q6P8I6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cox11Q6P8I6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cox11Q6P8I6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cox11Q6P8I6 Gm24804-201ENSMUST00000174982 85 ntBASIC18.38■□□□□ 0.53
Cox11Q6P8I6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cox11Q6P8I6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cox11Q6P8I6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cox11Q6P8I6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.36■□□□□ 0.53
Cox11Q6P8I6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cox11Q6P8I6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cox11Q6P8I6 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.33■□□□□ 0.52
Cox11Q6P8I6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cox11Q6P8I6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cox11Q6P8I6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cox11Q6P8I6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cox11Q6P8I6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cox11Q6P8I6 Mipep-204ENSMUST00000225043 1548 ntBASIC18.28■□□□□ 0.52
Cox11Q6P8I6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cox11Q6P8I6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cox11Q6P8I6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cox11Q6P8I6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cox11Q6P8I6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cox11Q6P8I6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cox11Q6P8I6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cox11Q6P8I6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cox11Q6P8I6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cox11Q6P8I6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cox11Q6P8I6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cox11Q6P8I6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.23■□□□□ 0.51
Cox11Q6P8I6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cox11Q6P8I6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cox11Q6P8I6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cox11Q6P8I6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cox11Q6P8I6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cox11Q6P8I6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cox11Q6P8I6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cox11Q6P8I6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cox11Q6P8I6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms