Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
Best3Q6H1V1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
Best3Q6H1V1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Best3Q6H1V1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Best3Q6H1V1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.43■■■□□ 2.78
Best3Q6H1V1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Best3Q6H1V1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Best3Q6H1V1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.38■■■□□ 2.77
Best3Q6H1V1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Best3Q6H1V1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.37■■■□□ 2.77
Best3Q6H1V1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.37■■■□□ 2.77
Best3Q6H1V1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Best3Q6H1V1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Best3Q6H1V1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Best3Q6H1V1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Best3Q6H1V1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.29■■■□□ 2.76
Best3Q6H1V1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Best3Q6H1V1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Best3Q6H1V1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.26■■■□□ 2.75
Best3Q6H1V1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Best3Q6H1V1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Best3Q6H1V1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Best3Q6H1V1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.16■■■□□ 2.74
Best3Q6H1V1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Best3Q6H1V1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Best3Q6H1V1 Gm45855-201ENSMUST00000212546 880 ntBASIC32.11■■■□□ 2.73
Best3Q6H1V1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Best3Q6H1V1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
Best3Q6H1V1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Best3Q6H1V1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Best3Q6H1V1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Best3Q6H1V1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.05■■■□□ 2.72
Best3Q6H1V1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Best3Q6H1V1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.04■■■□□ 2.72
Best3Q6H1V1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Best3Q6H1V1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Best3Q6H1V1 Gm9397-201ENSMUST00000200125 605 ntBASIC31.99■■■□□ 2.71
Best3Q6H1V1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Best3Q6H1V1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Best3Q6H1V1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Best3Q6H1V1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.93■■■□□ 2.7
Best3Q6H1V1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Best3Q6H1V1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Best3Q6H1V1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Best3Q6H1V1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Best3Q6H1V1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.87■■■□□ 2.69
Best3Q6H1V1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.86■■■□□ 2.69
Best3Q6H1V1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Best3Q6H1V1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Best3Q6H1V1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Best3Q6H1V1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.82■■■□□ 2.68
Best3Q6H1V1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Best3Q6H1V1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Best3Q6H1V1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Best3Q6H1V1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.79■■■□□ 2.68
Best3Q6H1V1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Best3Q6H1V1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.78■■■□□ 2.68
Best3Q6H1V1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.77■■■□□ 2.68
Best3Q6H1V1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Best3Q6H1V1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Best3Q6H1V1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Best3Q6H1V1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Best3Q6H1V1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Best3Q6H1V1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.74■■■□□ 2.67
Best3Q6H1V1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Best3Q6H1V1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Best3Q6H1V1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
Best3Q6H1V1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Best3Q6H1V1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Best3Q6H1V1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
Best3Q6H1V1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Best3Q6H1V1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Best3Q6H1V1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Best3Q6H1V1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.65■■■□□ 2.66
Best3Q6H1V1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Best3Q6H1V1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.61■■■□□ 2.65
Best3Q6H1V1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Best3Q6H1V1 Gm24970-201ENSMUST00000175582 82 ntBASIC31.59■■■□□ 2.65
Best3Q6H1V1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Best3Q6H1V1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Best3Q6H1V1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Best3Q6H1V1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
Best3Q6H1V1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Best3Q6H1V1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.54■■■□□ 2.64
Best3Q6H1V1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Best3Q6H1V1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.52■■■□□ 2.64
Best3Q6H1V1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
Best3Q6H1V1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Best3Q6H1V1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Best3Q6H1V1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
Best3Q6H1V1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Best3Q6H1V1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Best3Q6H1V1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.46■■■□□ 2.63
Best3Q6H1V1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Best3Q6H1V1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Best3Q6H1V1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Best3Q6H1V1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Best3Q6H1V1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Best3Q6H1V1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Best3Q6H1V1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.4■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms