Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Clcn1Q64347 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Clcn1Q64347 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
Clcn1Q64347 Mipep-204ENSMUST00000225043 1548 ntBASIC33.89■■■■□ 3.02
Clcn1Q64347 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Clcn1Q64347 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC33.86■■■■□ 3.01
Clcn1Q64347 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Clcn1Q64347 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Clcn1Q64347 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Clcn1Q64347 Tdp2-203ENSMUST00000223804 1136 ntBASIC33.81■■■■□ 3
Clcn1Q64347 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33.8■■■■□ 3
Clcn1Q64347 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC33.8■■■■□ 3
Clcn1Q64347 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33.8■■■■□ 3
Clcn1Q64347 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.79■■■■□ 3
Clcn1Q64347 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Clcn1Q64347 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC33.76■■■□□ 2.99
Clcn1Q64347 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
Clcn1Q64347 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Clcn1Q64347 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
Clcn1Q64347 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Clcn1Q64347 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.72■■■□□ 2.99
Clcn1Q64347 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Clcn1Q64347 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Clcn1Q64347 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Clcn1Q64347 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Clcn1Q64347 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
Clcn1Q64347 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC33.58■■■□□ 2.97
Clcn1Q64347 Gm45855-201ENSMUST00000212546 880 ntBASIC33.57■■■□□ 2.96
Clcn1Q64347 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.57■■■□□ 2.96
Clcn1Q64347 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
Clcn1Q64347 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.55■■■□□ 2.96
Clcn1Q64347 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Clcn1Q64347 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.47■■■□□ 2.95
Clcn1Q64347 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Clcn1Q64347 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.45■■■□□ 2.95
Clcn1Q64347 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Clcn1Q64347 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Clcn1Q64347 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Clcn1Q64347 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Clcn1Q64347 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Clcn1Q64347 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.39■■■□□ 2.94
Clcn1Q64347 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
Clcn1Q64347 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC33.38■■■□□ 2.93
Clcn1Q64347 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Clcn1Q64347 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Clcn1Q64347 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Clcn1Q64347 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Clcn1Q64347 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Clcn1Q64347 Gm9397-201ENSMUST00000200125 605 ntBASIC33.3■■■□□ 2.92
Clcn1Q64347 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Clcn1Q64347 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Clcn1Q64347 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Clcn1Q64347 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Clcn1Q64347 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
Clcn1Q64347 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Clcn1Q64347 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.24■■■□□ 2.91
Clcn1Q64347 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Clcn1Q64347 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Clcn1Q64347 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Clcn1Q64347 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Clcn1Q64347 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Clcn1Q64347 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Clcn1Q64347 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.2■■■□□ 2.91
Clcn1Q64347 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.19■■■□□ 2.9
Clcn1Q64347 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Clcn1Q64347 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.18■■■□□ 2.9
Clcn1Q64347 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Clcn1Q64347 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Clcn1Q64347 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC33.15■■■□□ 2.9
Clcn1Q64347 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Clcn1Q64347 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Clcn1Q64347 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
Clcn1Q64347 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC33.08■■■□□ 2.89
Clcn1Q64347 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
Clcn1Q64347 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Clcn1Q64347 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Clcn1Q64347 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Clcn1Q64347 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Clcn1Q64347 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.03■■■□□ 2.88
Clcn1Q64347 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Clcn1Q64347 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Clcn1Q64347 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Clcn1Q64347 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Clcn1Q64347 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
Clcn1Q64347 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Clcn1Q64347 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.94■■■□□ 2.86
Clcn1Q64347 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.94■■■□□ 2.86
Clcn1Q64347 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Clcn1Q64347 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Clcn1Q64347 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Clcn1Q64347 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.88■■■□□ 2.85
Clcn1Q64347 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.88■■■□□ 2.85
Clcn1Q64347 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Clcn1Q64347 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Clcn1Q64347 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Clcn1Q64347 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Clcn1Q64347 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Clcn1Q64347 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Clcn1Q64347 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Clcn1Q64347 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.78■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms