Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.87■■□□□ 1.25
Traf4Q61382 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Traf4Q61382 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Traf4Q61382 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Traf4Q61382 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.81■■□□□ 1.24
Traf4Q61382 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Traf4Q61382 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Traf4Q61382 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Traf4Q61382 Zfp131-205ENSMUST00000223812 663 ntBASIC22.78■■□□□ 1.24
Traf4Q61382 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Traf4Q61382 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Traf4Q61382 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Traf4Q61382 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Traf4Q61382 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Traf4Q61382 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Traf4Q61382 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Traf4Q61382 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Traf4Q61382 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Traf4Q61382 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Traf4Q61382 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Traf4Q61382 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Traf4Q61382 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Traf4Q61382 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Traf4Q61382 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Traf4Q61382 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.61■■□□□ 1.21
Traf4Q61382 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Traf4Q61382 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Traf4Q61382 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.59■■□□□ 1.21
Traf4Q61382 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Traf4Q61382 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.58■■□□□ 1.21
Traf4Q61382 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Traf4Q61382 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Traf4Q61382 Gm16148-201ENSMUST00000119653 893 ntBASIC22.56■■□□□ 1.2
Traf4Q61382 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Traf4Q61382 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Traf4Q61382 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Traf4Q61382 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Traf4Q61382 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Traf4Q61382 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Traf4Q61382 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.52■■□□□ 1.2
Traf4Q61382 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Traf4Q61382 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Traf4Q61382 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Traf4Q61382 Peli2-204ENSMUST00000226513 1320 ntBASIC22.5■■□□□ 1.19
Traf4Q61382 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Traf4Q61382 Mipep-204ENSMUST00000225043 1548 ntBASIC22.48■■□□□ 1.19
Traf4Q61382 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Traf4Q61382 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Traf4Q61382 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Traf4Q61382 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.45■■□□□ 1.18
Traf4Q61382 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Traf4Q61382 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Traf4Q61382 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Traf4Q61382 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Traf4Q61382 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Traf4Q61382 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.41■■□□□ 1.18
Traf4Q61382 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Traf4Q61382 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Traf4Q61382 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Traf4Q61382 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Traf4Q61382 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Traf4Q61382 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Traf4Q61382 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Traf4Q61382 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Traf4Q61382 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Traf4Q61382 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Traf4Q61382 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Traf4Q61382 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Traf4Q61382 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Traf4Q61382 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.28■■□□□ 1.16
Traf4Q61382 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Traf4Q61382 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Traf4Q61382 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Traf4Q61382 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Traf4Q61382 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Traf4Q61382 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.26■■□□□ 1.15
Traf4Q61382 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.26■■□□□ 1.15
Traf4Q61382 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.25■■□□□ 1.15
Traf4Q61382 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Traf4Q61382 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Traf4Q61382 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.2■■□□□ 1.14
Traf4Q61382 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.2■■□□□ 1.14
Traf4Q61382 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.18■■□□□ 1.14
Traf4Q61382 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Traf4Q61382 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Traf4Q61382 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Traf4Q61382 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Traf4Q61382 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Traf4Q61382 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Traf4Q61382 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Traf4Q61382 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Traf4Q61382 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Traf4Q61382 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Traf4Q61382 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Traf4Q61382 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Traf4Q61382 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Traf4Q61382 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Traf4Q61382 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Traf4Q61382 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Traf4Q61382 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms