Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Trav7-2Q5R1I3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-2Q5R1I3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-2Q5R1I3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-2Q5R1I3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-2Q5R1I3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Trav7-2Q5R1I3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7-2Q5R1I3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19■□□□□ 0.63
Trav7-2Q5R1I3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav7-2Q5R1I3 Gm8109-201ENSMUST00000194076 746 ntBASIC18.98■□□□□ 0.63
Trav7-2Q5R1I3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trav7-2Q5R1I3 Mipep-204ENSMUST00000225043 1548 ntBASIC18.98■□□□□ 0.63
Trav7-2Q5R1I3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7-2Q5R1I3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav7-2Q5R1I3 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.97■□□□□ 0.63
Trav7-2Q5R1I3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trav7-2Q5R1I3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav7-2Q5R1I3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.96■□□□□ 0.63
Trav7-2Q5R1I3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav7-2Q5R1I3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav7-2Q5R1I3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trav7-2Q5R1I3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav7-2Q5R1I3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-2Q5R1I3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-2Q5R1I3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav7-2Q5R1I3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-2Q5R1I3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-2Q5R1I3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trav7-2Q5R1I3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav7-2Q5R1I3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-2Q5R1I3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trav7-2Q5R1I3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav7-2Q5R1I3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-2Q5R1I3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav7-2Q5R1I3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-2Q5R1I3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-2Q5R1I3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav7-2Q5R1I3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-2Q5R1I3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav7-2Q5R1I3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7-2Q5R1I3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7-2Q5R1I3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7-2Q5R1I3 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.75■□□□□ 0.59
Trav7-2Q5R1I3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.75■□□□□ 0.59
Trav7-2Q5R1I3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-2Q5R1I3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-2Q5R1I3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7-2Q5R1I3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7-2Q5R1I3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav7-2Q5R1I3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trav7-2Q5R1I3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-2Q5R1I3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7-2Q5R1I3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7-2Q5R1I3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-2Q5R1I3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-2Q5R1I3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-2Q5R1I3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-2Q5R1I3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7-2Q5R1I3 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.65■□□□□ 0.58
Trav7-2Q5R1I3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-2Q5R1I3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav7-2Q5R1I3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7-2Q5R1I3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-2Q5R1I3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trav7-2Q5R1I3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-2Q5R1I3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav7-2Q5R1I3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7-2Q5R1I3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7-2Q5R1I3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-2Q5R1I3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7-2Q5R1I3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.58■□□□□ 0.56
Trav7-2Q5R1I3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav7-2Q5R1I3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7-2Q5R1I3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7-2Q5R1I3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7-2Q5R1I3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7-2Q5R1I3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7-2Q5R1I3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 Gm24804-201ENSMUST00000174982 85 ntBASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-2Q5R1I3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav7-2Q5R1I3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-2Q5R1I3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-2Q5R1I3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-2Q5R1I3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav7-2Q5R1I3 Peli2-204ENSMUST00000226513 1320 ntBASIC18.49■□□□□ 0.55
Trav7-2Q5R1I3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-2Q5R1I3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-2Q5R1I3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-2Q5R1I3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-2Q5R1I3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-2Q5R1I3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms