Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.07■□□□□ 0.96
Znf48Q3US17 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Znf48Q3US17 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Znf48Q3US17 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Znf48Q3US17 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Znf48Q3US17 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.05■□□□□ 0.96
Znf48Q3US17 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.05■□□□□ 0.96
Znf48Q3US17 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Znf48Q3US17 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Znf48Q3US17 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Znf48Q3US17 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Znf48Q3US17 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Znf48Q3US17 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf48Q3US17 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Znf48Q3US17 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.02■□□□□ 0.96
Znf48Q3US17 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21■□□□□ 0.95
Znf48Q3US17 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Znf48Q3US17 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Znf48Q3US17 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Znf48Q3US17 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Znf48Q3US17 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Znf48Q3US17 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Znf48Q3US17 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Znf48Q3US17 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Znf48Q3US17 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Znf48Q3US17 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Znf48Q3US17 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Znf48Q3US17 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Znf48Q3US17 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.93■□□□□ 0.94
Znf48Q3US17 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Znf48Q3US17 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Znf48Q3US17 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf48Q3US17 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Znf48Q3US17 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.89■□□□□ 0.93
Znf48Q3US17 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Znf48Q3US17 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.87■□□□□ 0.93
Znf48Q3US17 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Znf48Q3US17 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Znf48Q3US17 Gm45855-201ENSMUST00000212546 880 ntBASIC20.83■□□□□ 0.93
Znf48Q3US17 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Znf48Q3US17 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.82■□□□□ 0.92
Znf48Q3US17 Peli2-204ENSMUST00000226513 1320 ntBASIC20.82■□□□□ 0.92
Znf48Q3US17 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Znf48Q3US17 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Znf48Q3US17 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Znf48Q3US17 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Znf48Q3US17 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Znf48Q3US17 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Znf48Q3US17 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Znf48Q3US17 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Znf48Q3US17 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Znf48Q3US17 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Znf48Q3US17 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Znf48Q3US17 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Znf48Q3US17 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Znf48Q3US17 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Znf48Q3US17 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.71■□□□□ 0.91
Znf48Q3US17 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Znf48Q3US17 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Znf48Q3US17 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Znf48Q3US17 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Znf48Q3US17 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Znf48Q3US17 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Znf48Q3US17 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Znf48Q3US17 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Znf48Q3US17 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Znf48Q3US17 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Znf48Q3US17 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf48Q3US17 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Znf48Q3US17 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.64■□□□□ 0.89
Znf48Q3US17 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Znf48Q3US17 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf48Q3US17 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf48Q3US17 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Znf48Q3US17 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Znf48Q3US17 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Znf48Q3US17 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.6■□□□□ 0.89
Znf48Q3US17 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Znf48Q3US17 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.59■□□□□ 0.89
Znf48Q3US17 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Znf48Q3US17 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Znf48Q3US17 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Znf48Q3US17 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.57■□□□□ 0.88
Znf48Q3US17 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf48Q3US17 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf48Q3US17 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf48Q3US17 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.55■□□□□ 0.88
Znf48Q3US17 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Znf48Q3US17 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Znf48Q3US17 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.55■□□□□ 0.88
Znf48Q3US17 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Znf48Q3US17 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Znf48Q3US17 Gm9397-201ENSMUST00000200125 605 ntBASIC20.54■□□□□ 0.88
Znf48Q3US17 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Znf48Q3US17 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Znf48Q3US17 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf48Q3US17 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Znf48Q3US17 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Znf48Q3US17 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Znf48Q3US17 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms