Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Arhgef40Q3UPH7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC40.38■■■■■ 4.06
Arhgef40Q3UPH7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Arhgef40Q3UPH7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Arhgef40Q3UPH7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
Arhgef40Q3UPH7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC40.34■■■■■ 4.05
Arhgef40Q3UPH7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC40.32■■■■■ 4.05
Arhgef40Q3UPH7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Arhgef40Q3UPH7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
Arhgef40Q3UPH7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
Arhgef40Q3UPH7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC40.28■■■■■ 4.04
Arhgef40Q3UPH7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC40.22■■■■■ 4.03
Arhgef40Q3UPH7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC40.21■■■■■ 4.03
Arhgef40Q3UPH7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
Arhgef40Q3UPH7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC40.18■■■■■ 4.02
Arhgef40Q3UPH7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC40.18■■■■■ 4.02
Arhgef40Q3UPH7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC40.18■■■■■ 4.02
Arhgef40Q3UPH7 Tdp2-203ENSMUST00000223804 1136 ntBASIC40.13■■■■■ 4.01
Arhgef40Q3UPH7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
Arhgef40Q3UPH7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC40.12■■■■■ 4.01
Arhgef40Q3UPH7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Arhgef40Q3UPH7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Arhgef40Q3UPH7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC40.06■■■■■ 4
Arhgef40Q3UPH7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC40.05■■■■■ 4
Arhgef40Q3UPH7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC40.03■■■■■ 4
Arhgef40Q3UPH7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC40.02■■■■■ 4
Arhgef40Q3UPH7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
Arhgef40Q3UPH7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
Arhgef40Q3UPH7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC39.95■■■■□ 3.99
Arhgef40Q3UPH7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Arhgef40Q3UPH7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
Arhgef40Q3UPH7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Arhgef40Q3UPH7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC39.85■■■■□ 3.97
Arhgef40Q3UPH7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC39.83■■■■□ 3.97
Arhgef40Q3UPH7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Arhgef40Q3UPH7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
Arhgef40Q3UPH7 Gm45855-201ENSMUST00000212546 880 ntBASIC39.76■■■■□ 3.96
Arhgef40Q3UPH7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Arhgef40Q3UPH7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Arhgef40Q3UPH7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Arhgef40Q3UPH7 Gm9397-201ENSMUST00000200125 605 ntBASIC39.72■■■■□ 3.95
Arhgef40Q3UPH7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC39.71■■■■□ 3.95
Arhgef40Q3UPH7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC39.7■■■■□ 3.95
Arhgef40Q3UPH7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC39.7■■■■□ 3.95
Arhgef40Q3UPH7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
Arhgef40Q3UPH7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
Arhgef40Q3UPH7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC39.62■■■■□ 3.93
Arhgef40Q3UPH7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
Arhgef40Q3UPH7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC39.61■■■■□ 3.93
Arhgef40Q3UPH7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC39.61■■■■□ 3.93
Arhgef40Q3UPH7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC39.6■■■■□ 3.93
Arhgef40Q3UPH7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Arhgef40Q3UPH7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Arhgef40Q3UPH7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
Arhgef40Q3UPH7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
Arhgef40Q3UPH7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC39.55■■■■□ 3.92
Arhgef40Q3UPH7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
Arhgef40Q3UPH7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Arhgef40Q3UPH7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Arhgef40Q3UPH7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
Arhgef40Q3UPH7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC39.52■■■■□ 3.92
Arhgef40Q3UPH7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Arhgef40Q3UPH7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC39.5■■■■□ 3.91
Arhgef40Q3UPH7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
Arhgef40Q3UPH7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Arhgef40Q3UPH7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC39.42■■■■□ 3.9
Arhgef40Q3UPH7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC39.41■■■■□ 3.9
Arhgef40Q3UPH7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Arhgef40Q3UPH7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
Arhgef40Q3UPH7 Gm5987-201ENSMUST00000196433 1151 ntBASIC39.38■■■■□ 3.89
Arhgef40Q3UPH7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
Arhgef40Q3UPH7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC39.37■■■■□ 3.89
Arhgef40Q3UPH7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC39.36■■■■□ 3.89
Arhgef40Q3UPH7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
Arhgef40Q3UPH7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC39.34■■■■□ 3.89
Arhgef40Q3UPH7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC39.34■■■■□ 3.89
Arhgef40Q3UPH7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
Arhgef40Q3UPH7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC39.33■■■■□ 3.89
Arhgef40Q3UPH7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC39.32■■■■□ 3.89
Arhgef40Q3UPH7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
Arhgef40Q3UPH7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Arhgef40Q3UPH7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Arhgef40Q3UPH7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
Arhgef40Q3UPH7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC39.3■■■■□ 3.88
Arhgef40Q3UPH7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC39.27■■■■□ 3.88
Arhgef40Q3UPH7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC39.26■■■■□ 3.88
Arhgef40Q3UPH7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
Arhgef40Q3UPH7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Arhgef40Q3UPH7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Arhgef40Q3UPH7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC39.23■■■■□ 3.87
Arhgef40Q3UPH7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC39.22■■■■□ 3.87
Arhgef40Q3UPH7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Arhgef40Q3UPH7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Arhgef40Q3UPH7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC39.17■■■■□ 3.86
Arhgef40Q3UPH7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC39.17■■■■□ 3.86
Arhgef40Q3UPH7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
Arhgef40Q3UPH7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC39.17■■■■□ 3.86
Arhgef40Q3UPH7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
Arhgef40Q3UPH7 Gm24970-201ENSMUST00000175582 82 ntBASIC39.15■■■■□ 3.86
Arhgef40Q3UPH7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms