Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sec61a1P61620 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sec61a1P61620 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
Sec61a1P61620 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sec61a1P61620 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sec61a1P61620 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sec61a1P61620 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sec61a1P61620 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sec61a1P61620 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.45■■□□□ 1.18
Sec61a1P61620 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sec61a1P61620 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sec61a1P61620 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sec61a1P61620 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.43■■□□□ 1.18
Sec61a1P61620 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sec61a1P61620 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.41■■□□□ 1.18
Sec61a1P61620 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a1P61620 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a1P61620 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sec61a1P61620 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.38■■□□□ 1.17
Sec61a1P61620 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sec61a1P61620 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sec61a1P61620 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sec61a1P61620 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sec61a1P61620 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sec61a1P61620 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.3■■□□□ 1.16
Sec61a1P61620 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.3■■□□□ 1.16
Sec61a1P61620 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a1P61620 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a1P61620 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.28■■□□□ 1.16
Sec61a1P61620 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.28■■□□□ 1.16
Sec61a1P61620 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.27■■□□□ 1.16
Sec61a1P61620 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Sec61a1P61620 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Sec61a1P61620 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sec61a1P61620 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sec61a1P61620 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sec61a1P61620 Gm24804-201ENSMUST00000174982 85 ntBASIC22.25■■□□□ 1.15
Sec61a1P61620 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.25■■□□□ 1.15
Sec61a1P61620 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sec61a1P61620 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sec61a1P61620 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sec61a1P61620 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Sec61a1P61620 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.21■■□□□ 1.15
Sec61a1P61620 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sec61a1P61620 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sec61a1P61620 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sec61a1P61620 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sec61a1P61620 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a1P61620 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a1P61620 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a1P61620 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Sec61a1P61620 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a1P61620 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a1P61620 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sec61a1P61620 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sec61a1P61620 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
Sec61a1P61620 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a1P61620 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a1P61620 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a1P61620 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a1P61620 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Sec61a1P61620 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a1P61620 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a1P61620 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sec61a1P61620 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Sec61a1P61620 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sec61a1P61620 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec61a1P61620 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec61a1P61620 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.99■■□□□ 1.11
Sec61a1P61620 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Sec61a1P61620 Mipep-204ENSMUST00000225043 1548 ntBASIC21.97■■□□□ 1.11
Sec61a1P61620 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sec61a1P61620 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sec61a1P61620 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.94■■□□□ 1.1
Sec61a1P61620 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sec61a1P61620 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Sec61a1P61620 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sec61a1P61620 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sec61a1P61620 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a1P61620 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a1P61620 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Sec61a1P61620 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sec61a1P61620 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms