Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx6P54823 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Ddx6P54823 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx6P54823 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx6P54823 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx6P54823 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx6P54823 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx6P54823 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Ddx6P54823 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx6P54823 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ddx6P54823 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx6P54823 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx6P54823 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.19■■□□□ 1.94
Ddx6P54823 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Ddx6P54823 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.19■■□□□ 1.94
Ddx6P54823 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.19■■□□□ 1.94
Ddx6P54823 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx6P54823 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx6P54823 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx6P54823 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.15■■□□□ 1.94
Ddx6P54823 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx6P54823 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx6P54823 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.13■■□□□ 1.93
Ddx6P54823 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx6P54823 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ddx6P54823 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx6P54823 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.06■■□□□ 1.92
Ddx6P54823 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx6P54823 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx6P54823 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx6P54823 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.02■■□□□ 1.92
Ddx6P54823 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx6P54823 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx6P54823 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx6P54823 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx6P54823 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx6P54823 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx6P54823 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Ddx6P54823 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx6P54823 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.86■■□□□ 1.89
Ddx6P54823 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx6P54823 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx6P54823 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.84■■□□□ 1.89
Ddx6P54823 Gm45855-201ENSMUST00000212546 880 ntBASIC26.83■■□□□ 1.89
Ddx6P54823 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.83■■□□□ 1.89
Ddx6P54823 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Ddx6P54823 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Ddx6P54823 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Ddx6P54823 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.81■■□□□ 1.88
Ddx6P54823 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx6P54823 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx6P54823 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx6P54823 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
Ddx6P54823 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx6P54823 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx6P54823 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx6P54823 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx6P54823 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx6P54823 Gm9397-201ENSMUST00000200125 605 ntBASIC26.73■■□□□ 1.87
Ddx6P54823 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx6P54823 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Ddx6P54823 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx6P54823 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx6P54823 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx6P54823 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Ddx6P54823 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx6P54823 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx6P54823 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx6P54823 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx6P54823 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx6P54823 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.63■■□□□ 1.85
Ddx6P54823 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.62■■□□□ 1.85
Ddx6P54823 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.62■■□□□ 1.85
Ddx6P54823 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx6P54823 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.6■■□□□ 1.85
Ddx6P54823 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx6P54823 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Ddx6P54823 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.56■■□□□ 1.84
Ddx6P54823 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx6P54823 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Ddx6P54823 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Ddx6P54823 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.53■■□□□ 1.84
Ddx6P54823 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx6P54823 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx6P54823 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx6P54823 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx6P54823 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.5■■□□□ 1.83
Ddx6P54823 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx6P54823 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
Ddx6P54823 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx6P54823 Gm24970-201ENSMUST00000175582 82 ntBASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms