Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl6P27784 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Ccl6P27784 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl6P27784 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccl6P27784 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccl6P27784 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.17■□□□□ 0.82
Ccl6P27784 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccl6P27784 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccl6P27784 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.15■□□□□ 0.82
Ccl6P27784 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccl6P27784 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl6P27784 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl6P27784 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccl6P27784 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccl6P27784 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl6P27784 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl6P27784 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccl6P27784 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl6P27784 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl6P27784 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl6P27784 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl6P27784 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl6P27784 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl6P27784 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl6P27784 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccl6P27784 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl6P27784 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl6P27784 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccl6P27784 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl6P27784 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccl6P27784 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccl6P27784 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl6P27784 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl6P27784 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccl6P27784 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccl6P27784 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.91■□□□□ 0.78
Ccl6P27784 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl6P27784 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccl6P27784 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl6P27784 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccl6P27784 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl6P27784 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl6P27784 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl6P27784 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccl6P27784 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl6P27784 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Ccl6P27784 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl6P27784 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl6P27784 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccl6P27784 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccl6P27784 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl6P27784 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccl6P27784 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccl6P27784 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.84■□□□□ 0.77
Ccl6P27784 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccl6P27784 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccl6P27784 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl6P27784 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl6P27784 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccl6P27784 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccl6P27784 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccl6P27784 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl6P27784 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccl6P27784 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccl6P27784 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ccl6P27784 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccl6P27784 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccl6P27784 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccl6P27784 Peli2-204ENSMUST00000226513 1320 ntBASIC19.74■□□□□ 0.75
Ccl6P27784 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl6P27784 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccl6P27784 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl6P27784 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccl6P27784 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.72■□□□□ 0.75
Ccl6P27784 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl6P27784 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccl6P27784 Gm24804-201ENSMUST00000174982 85 ntBASIC19.7■□□□□ 0.74
Ccl6P27784 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccl6P27784 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccl6P27784 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl6P27784 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl6P27784 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl6P27784 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccl6P27784 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Ccl6P27784 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccl6P27784 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccl6P27784 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccl6P27784 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccl6P27784 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl6P27784 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccl6P27784 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccl6P27784 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccl6P27784 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl6P27784 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Ccl6P27784 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl6P27784 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccl6P27784 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccl6P27784 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccl6P27784 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccl6P27784 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms