Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf9P20334 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf9P20334 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.98■□□□□ 0.95
Tnfrsf9P20334 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf9P20334 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf9P20334 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf9P20334 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf9P20334 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf9P20334 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tnfrsf9P20334 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfrsf9P20334 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.92■□□□□ 0.94
Tnfrsf9P20334 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.92■□□□□ 0.94
Tnfrsf9P20334 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfrsf9P20334 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfrsf9P20334 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf9P20334 Gm45855-201ENSMUST00000212546 880 ntBASIC20.9■□□□□ 0.94
Tnfrsf9P20334 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tnfrsf9P20334 Peli2-204ENSMUST00000226513 1320 ntBASIC20.87■□□□□ 0.93
Tnfrsf9P20334 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf9P20334 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tnfrsf9P20334 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf9P20334 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf9P20334 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf9P20334 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf9P20334 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf9P20334 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf9P20334 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf9P20334 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf9P20334 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnfrsf9P20334 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf9P20334 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnfrsf9P20334 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf9P20334 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf9P20334 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf9P20334 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf9P20334 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf9P20334 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf9P20334 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf9P20334 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf9P20334 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf9P20334 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf9P20334 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf9P20334 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf9P20334 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tnfrsf9P20334 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.66■□□□□ 0.9
Tnfrsf9P20334 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.66■□□□□ 0.9
Tnfrsf9P20334 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf9P20334 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.66■□□□□ 0.9
Tnfrsf9P20334 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf9P20334 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf9P20334 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf9P20334 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf9P20334 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf9P20334 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf9P20334 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf9P20334 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf9P20334 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.6■□□□□ 0.89
Tnfrsf9P20334 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf9P20334 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf9P20334 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.58■□□□□ 0.89
Tnfrsf9P20334 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.58■□□□□ 0.88
Tnfrsf9P20334 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Tnfrsf9P20334 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf9P20334 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf9P20334 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf9P20334 Gm9397-201ENSMUST00000200125 605 ntBASIC20.57■□□□□ 0.88
Tnfrsf9P20334 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf9P20334 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf9P20334 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf9P20334 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.55■□□□□ 0.88
Tnfrsf9P20334 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tnfrsf9P20334 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf9P20334 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf9P20334 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf9P20334 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf9P20334 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf9P20334 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf9P20334 Mipep-204ENSMUST00000225043 1548 ntBASIC20.51■□□□□ 0.87
Tnfrsf9P20334 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf9P20334 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf9P20334 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf9P20334 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf9P20334 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf9P20334 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tnfrsf9P20334 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf9P20334 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf9P20334 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf9P20334 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf9P20334 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf9P20334 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf9P20334 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf9P20334 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tnfrsf9P20334 Zxda-201ENSMUST00000117281 2621 ntBASIC20.43■□□□□ 0.86
Tnfrsf9P20334 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf9P20334 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.42■□□□□ 0.86
Tnfrsf9P20334 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnfrsf9P20334 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Tnfrsf9P20334 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.4■□□□□ 0.86
Tnfrsf9P20334 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf9P20334 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms