Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.34■■□□□ 1.33
TpbpaP13438 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TpbpaP13438 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.33■■□□□ 1.32
TpbpaP13438 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TpbpaP13438 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TpbpaP13438 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TpbpaP13438 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TpbpaP13438 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TpbpaP13438 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TpbpaP13438 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TpbpaP13438 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TpbpaP13438 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TpbpaP13438 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TpbpaP13438 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TpbpaP13438 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TpbpaP13438 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TpbpaP13438 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TpbpaP13438 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TpbpaP13438 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TpbpaP13438 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TpbpaP13438 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.18■■□□□ 1.3
TpbpaP13438 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TpbpaP13438 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TpbpaP13438 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TpbpaP13438 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TpbpaP13438 Mipep-204ENSMUST00000225043 1548 ntBASIC23.14■■□□□ 1.3
TpbpaP13438 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TpbpaP13438 Gm25262-201ENSMUST00000174934 133 ntBASIC23.13■■□□□ 1.29
TpbpaP13438 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TpbpaP13438 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
TpbpaP13438 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TpbpaP13438 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TpbpaP13438 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TpbpaP13438 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TpbpaP13438 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
TpbpaP13438 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TpbpaP13438 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.04■■□□□ 1.28
TpbpaP13438 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TpbpaP13438 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TpbpaP13438 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TpbpaP13438 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TpbpaP13438 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23■■□□□ 1.27
TpbpaP13438 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TpbpaP13438 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.99■■□□□ 1.27
TpbpaP13438 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TpbpaP13438 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TpbpaP13438 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TpbpaP13438 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
TpbpaP13438 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TpbpaP13438 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TpbpaP13438 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TpbpaP13438 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
TpbpaP13438 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TpbpaP13438 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TpbpaP13438 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TpbpaP13438 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TpbpaP13438 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TpbpaP13438 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TpbpaP13438 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TpbpaP13438 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TpbpaP13438 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TpbpaP13438 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TpbpaP13438 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.87■■□□□ 1.25
TpbpaP13438 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TpbpaP13438 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TpbpaP13438 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TpbpaP13438 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.85■■□□□ 1.25
TpbpaP13438 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TpbpaP13438 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TpbpaP13438 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TpbpaP13438 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.83■■□□□ 1.25
TpbpaP13438 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
TpbpaP13438 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TpbpaP13438 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TpbpaP13438 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.82■■□□□ 1.24
TpbpaP13438 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TpbpaP13438 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TpbpaP13438 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TpbpaP13438 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TpbpaP13438 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TpbpaP13438 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TpbpaP13438 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TpbpaP13438 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TpbpaP13438 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TpbpaP13438 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
TpbpaP13438 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TpbpaP13438 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TpbpaP13438 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TpbpaP13438 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TpbpaP13438 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TpbpaP13438 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TpbpaP13438 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TpbpaP13438 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TpbpaP13438 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
TpbpaP13438 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.7■■□□□ 1.22
TpbpaP13438 Gm27322-201ENSMUST00000184007 104 ntBASIC22.7■■□□□ 1.22
TpbpaP13438 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TpbpaP13438 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TpbpaP13438 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TpbpaP13438 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms