Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
P01739 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01739 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01739 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.52■□□□□ 0.72
P01739 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
P01739 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.52■□□□□ 0.72
P01739 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01739 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
P01739 Gm27322-201ENSMUST00000184007 104 ntBASIC19.49■□□□□ 0.71
P01739 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.49■□□□□ 0.71
P01739 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01739 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01739 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01739 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.45■□□□□ 0.7
P01739 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01739 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
P01739 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.43■□□□□ 0.7
P01739 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.42■□□□□ 0.7
P01739 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01739 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01739 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01739 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
P01739 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P01739 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01739 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P01739 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01739 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01739 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01739 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01739 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01739 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.34■□□□□ 0.69
P01739 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01739 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01739 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01739 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
P01739 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
P01739 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.32■□□□□ 0.68
P01739 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.31■□□□□ 0.68
P01739 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01739 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
P01739 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01739 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01739 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P01739 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01739 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01739 Gm26115-201ENSMUST00000175605 87 ntBASIC19.27■□□□□ 0.68
P01739 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01739 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01739 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01739 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01739 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
P01739 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P01739 Gm8109-201ENSMUST00000194076 746 ntBASIC19.23■□□□□ 0.67
P01739 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01739 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01739 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01739 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01739 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01739 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01739 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01739 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01739 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01739 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01739 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P01739 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01739 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01739 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01739 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01739 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01739 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01739 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01739 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01739 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01739 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
P01739 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P01739 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01739 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
P01739 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01739 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01739 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P01739 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.06■□□□□ 0.64
P01739 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P01739 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
P01739 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
P01739 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01739 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01739 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01739 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01739 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
P01739 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01739 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.02■□□□□ 0.64
P01739 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01739 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01739 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01739 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
P01739 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.99■□□□□ 0.63
P01739 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
P01739 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
P01739 Peli2-204ENSMUST00000226513 1320 ntBASIC18.98■□□□□ 0.63
P01739 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms