Protein–RNA interactions for Protein: O88796

Rpp30, Ribonuclease P protein subunit p30, mousemouse

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp30O88796 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp30O88796 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp30O88796 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp30O88796 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.18■□□□□ 0.82
Rpp30O88796 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp30O88796 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp30O88796 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rpp30O88796 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp30O88796 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rpp30O88796 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp30O88796 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp30O88796 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp30O88796 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp30O88796 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp30O88796 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp30O88796 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.13■□□□□ 0.81
Rpp30O88796 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpp30O88796 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp30O88796 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.11■□□□□ 0.81
Rpp30O88796 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpp30O88796 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp30O88796 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpp30O88796 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpp30O88796 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Rpp30O88796 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpp30O88796 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpp30O88796 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp30O88796 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp30O88796 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpp30O88796 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpp30O88796 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpp30O88796 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.01■□□□□ 0.79
Rpp30O88796 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rpp30O88796 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpp30O88796 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Rpp30O88796 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpp30O88796 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpp30O88796 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.96■□□□□ 0.79
Rpp30O88796 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpp30O88796 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.95■□□□□ 0.78
Rpp30O88796 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpp30O88796 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp30O88796 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpp30O88796 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpp30O88796 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp30O88796 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpp30O88796 Rab21-202ENSMUST00000218831 843 ntBASIC19.93■□□□□ 0.78
Rpp30O88796 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp30O88796 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp30O88796 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.89■□□□□ 0.77
Rpp30O88796 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp30O88796 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpp30O88796 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rpp30O88796 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Rpp30O88796 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp30O88796 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp30O88796 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Rpp30O88796 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rpp30O88796 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp30O88796 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp30O88796 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp30O88796 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp30O88796 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp30O88796 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp30O88796 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp30O88796 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rpp30O88796 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp30O88796 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp30O88796 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp30O88796 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rpp30O88796 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.81■□□□□ 0.76
Rpp30O88796 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rpp30O88796 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp30O88796 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp30O88796 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp30O88796 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp30O88796 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rpp30O88796 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp30O88796 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp30O88796 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp30O88796 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp30O88796 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rpp30O88796 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.77■□□□□ 0.75
Rpp30O88796 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp30O88796 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp30O88796 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.76■□□□□ 0.75
Rpp30O88796 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp30O88796 Mipep-204ENSMUST00000225043 1548 ntBASIC19.76■□□□□ 0.75
Rpp30O88796 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp30O88796 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp30O88796 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp30O88796 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.75■□□□□ 0.75
Rpp30O88796 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp30O88796 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp30O88796 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpp30O88796 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.73■□□□□ 0.75
Rpp30O88796 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp30O88796 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp30O88796 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp30O88796 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms