Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.57■■□□□ 1.36
Hps1O08983 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hps1O08983 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
Hps1O08983 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hps1O08983 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hps1O08983 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.55■■□□□ 1.36
Hps1O08983 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hps1O08983 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.53■■□□□ 1.36
Hps1O08983 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hps1O08983 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Hps1O08983 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.5■■□□□ 1.35
Hps1O08983 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Hps1O08983 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hps1O08983 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hps1O08983 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Hps1O08983 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Hps1O08983 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hps1O08983 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Hps1O08983 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hps1O08983 Zfp131-205ENSMUST00000223812 663 ntBASIC23.4■■□□□ 1.34
Hps1O08983 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.4■■□□□ 1.34
Hps1O08983 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Hps1O08983 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.39■■□□□ 1.34
Hps1O08983 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Hps1O08983 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hps1O08983 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
Hps1O08983 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hps1O08983 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hps1O08983 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Hps1O08983 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hps1O08983 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Hps1O08983 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Hps1O08983 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hps1O08983 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.27■■□□□ 1.32
Hps1O08983 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hps1O08983 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Hps1O08983 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Hps1O08983 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.25■■□□□ 1.31
Hps1O08983 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hps1O08983 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hps1O08983 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hps1O08983 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.21■■□□□ 1.31
Hps1O08983 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hps1O08983 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hps1O08983 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hps1O08983 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hps1O08983 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Hps1O08983 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hps1O08983 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hps1O08983 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Hps1O08983 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.13■■□□□ 1.29
Hps1O08983 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Hps1O08983 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.12■■□□□ 1.29
Hps1O08983 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Hps1O08983 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hps1O08983 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.11■■□□□ 1.29
Hps1O08983 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hps1O08983 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hps1O08983 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Hps1O08983 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hps1O08983 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.08■■□□□ 1.29
Hps1O08983 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hps1O08983 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hps1O08983 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hps1O08983 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.04■■□□□ 1.28
Hps1O08983 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hps1O08983 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Hps1O08983 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hps1O08983 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hps1O08983 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hps1O08983 Mipep-204ENSMUST00000225043 1548 ntBASIC22.99■■□□□ 1.27
Hps1O08983 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.99■■□□□ 1.27
Hps1O08983 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.99■■□□□ 1.27
Hps1O08983 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hps1O08983 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hps1O08983 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Hps1O08983 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Hps1O08983 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Hps1O08983 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hps1O08983 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hps1O08983 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Hps1O08983 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Hps1O08983 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Hps1O08983 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Hps1O08983 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.92■■□□□ 1.26
Hps1O08983 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms