Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ebf3O08791 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.31■■□□□ 1.96
Ebf3O08791 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Ebf3O08791 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ebf3O08791 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ebf3O08791 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Ebf3O08791 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ebf3O08791 Mipep-204ENSMUST00000225043 1548 ntBASIC27.25■■□□□ 1.95
Ebf3O08791 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ebf3O08791 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Ebf3O08791 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ebf3O08791 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Ebf3O08791 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.18■■□□□ 1.94
Ebf3O08791 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ebf3O08791 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.17■■□□□ 1.94
Ebf3O08791 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Ebf3O08791 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ebf3O08791 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ebf3O08791 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Ebf3O08791 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ebf3O08791 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.12■■□□□ 1.93
Ebf3O08791 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ebf3O08791 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ebf3O08791 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.1■■□□□ 1.93
Ebf3O08791 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ebf3O08791 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ebf3O08791 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ebf3O08791 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ebf3O08791 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ebf3O08791 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.05■■□□□ 1.92
Ebf3O08791 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.02■■□□□ 1.92
Ebf3O08791 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.01■■□□□ 1.91
Ebf3O08791 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ebf3O08791 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Ebf3O08791 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ebf3O08791 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.97■■□□□ 1.91
Ebf3O08791 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ebf3O08791 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ebf3O08791 Gm45855-201ENSMUST00000212546 880 ntBASIC26.9■■□□□ 1.9
Ebf3O08791 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ebf3O08791 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Ebf3O08791 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ebf3O08791 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.86■■□□□ 1.89
Ebf3O08791 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ebf3O08791 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ebf3O08791 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.84■■□□□ 1.89
Ebf3O08791 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ebf3O08791 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ebf3O08791 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ebf3O08791 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ebf3O08791 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ebf3O08791 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.79■■□□□ 1.88
Ebf3O08791 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ebf3O08791 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.78■■□□□ 1.88
Ebf3O08791 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ebf3O08791 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ebf3O08791 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ebf3O08791 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.76■■□□□ 1.88
Ebf3O08791 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ebf3O08791 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ebf3O08791 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ebf3O08791 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ebf3O08791 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ebf3O08791 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.69■■□□□ 1.86
Ebf3O08791 Gm9397-201ENSMUST00000200125 605 ntBASIC26.69■■□□□ 1.86
Ebf3O08791 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.69■■□□□ 1.86
Ebf3O08791 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ebf3O08791 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ebf3O08791 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.85
Ebf3O08791 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.62■■□□□ 1.85
Ebf3O08791 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ebf3O08791 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ebf3O08791 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ebf3O08791 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.59■■□□□ 1.85
Ebf3O08791 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ebf3O08791 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ebf3O08791 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ebf3O08791 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ebf3O08791 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ebf3O08791 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ebf3O08791 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ebf3O08791 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
Ebf3O08791 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ebf3O08791 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.54■■□□□ 1.84
Ebf3O08791 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ebf3O08791 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ebf3O08791 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.52■■□□□ 1.84
Ebf3O08791 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ebf3O08791 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ebf3O08791 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ebf3O08791 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.49■■□□□ 1.83
Ebf3O08791 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ebf3O08791 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ebf3O08791 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms