Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
AlyrefO08583 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.17■■□□□ 1.94
AlyrefO08583 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
AlyrefO08583 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
AlyrefO08583 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
AlyrefO08583 Gm9397-201ENSMUST00000200125 605 ntBASIC27.11■■□□□ 1.93
AlyrefO08583 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
AlyrefO08583 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
AlyrefO08583 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.05■■□□□ 1.92
AlyrefO08583 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
AlyrefO08583 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
AlyrefO08583 Gm9939-201ENSMUST00000067161 1154 ntBASIC27■■□□□ 1.91
AlyrefO08583 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
AlyrefO08583 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.96■■□□□ 1.91
AlyrefO08583 Gm8503-201ENSMUST00000118131 455 ntBASIC26.95■■□□□ 1.9
AlyrefO08583 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
AlyrefO08583 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
AlyrefO08583 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.9■■□□□ 1.9
AlyrefO08583 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.89■■□□□ 1.89
AlyrefO08583 Peli2-204ENSMUST00000226513 1320 ntBASIC26.89■■□□□ 1.89
AlyrefO08583 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
AlyrefO08583 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
AlyrefO08583 Gm15039-201ENSMUST00000118914 875 ntBASIC26.85■■□□□ 1.89
AlyrefO08583 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
AlyrefO08583 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.84■■□□□ 1.89
AlyrefO08583 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
AlyrefO08583 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
AlyrefO08583 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
AlyrefO08583 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
AlyrefO08583 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
AlyrefO08583 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
AlyrefO08583 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
AlyrefO08583 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
AlyrefO08583 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
AlyrefO08583 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.75■■□□□ 1.87
AlyrefO08583 Gm6821-201ENSMUST00000107540 542 ntBASIC26.73■■□□□ 1.87
AlyrefO08583 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
AlyrefO08583 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.67■■□□□ 1.86
AlyrefO08583 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
AlyrefO08583 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.66■■□□□ 1.86
AlyrefO08583 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
AlyrefO08583 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
AlyrefO08583 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
AlyrefO08583 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.63■■□□□ 1.85
AlyrefO08583 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.6■■□□□ 1.85
AlyrefO08583 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
AlyrefO08583 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.6■■□□□ 1.85
AlyrefO08583 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
AlyrefO08583 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
AlyrefO08583 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.55■■□□□ 1.84
AlyrefO08583 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
AlyrefO08583 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
AlyrefO08583 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
AlyrefO08583 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
AlyrefO08583 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
AlyrefO08583 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.5■■□□□ 1.83
AlyrefO08583 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.49■■□□□ 1.83
AlyrefO08583 Gm24970-201ENSMUST00000175582 82 ntBASIC26.48■■□□□ 1.83
AlyrefO08583 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
AlyrefO08583 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
AlyrefO08583 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
AlyrefO08583 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.43■■□□□ 1.82
AlyrefO08583 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.43■■□□□ 1.82
AlyrefO08583 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
AlyrefO08583 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.41■■□□□ 1.82
AlyrefO08583 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
AlyrefO08583 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
AlyrefO08583 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
AlyrefO08583 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.34■■□□□ 1.81
AlyrefO08583 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
AlyrefO08583 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
AlyrefO08583 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
AlyrefO08583 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
AlyrefO08583 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
AlyrefO08583 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
AlyrefO08583 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.28■■□□□ 1.8
AlyrefO08583 Mir6538-201ENSMUST00000183713 110 ntBASIC26.27■■□□□ 1.8
AlyrefO08583 Cap2-205ENSMUST00000225824 1634 ntBASIC26.25■■□□□ 1.79
AlyrefO08583 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.25■■□□□ 1.79
AlyrefO08583 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.21■■□□□ 1.79
AlyrefO08583 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
AlyrefO08583 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.2■■□□□ 1.78
AlyrefO08583 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
AlyrefO08583 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
AlyrefO08583 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
AlyrefO08583 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
AlyrefO08583 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
AlyrefO08583 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
AlyrefO08583 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
AlyrefO08583 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
AlyrefO08583 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
AlyrefO08583 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
AlyrefO08583 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
AlyrefO08583 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
AlyrefO08583 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
AlyrefO08583 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
AlyrefO08583 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.1■■□□□ 1.77
AlyrefO08583 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
AlyrefO08583 Gm7432-201ENSMUST00000210343 879 ntBASIC26.06■■□□□ 1.76
AlyrefO08583 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms