Protein–RNA interactions for Protein: K7N6K7

Sirpb1c, Signal-regulatory protein beta 1C, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1cK7N6K7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1cK7N6K7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1cK7N6K7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1cK7N6K7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1cK7N6K7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1cK7N6K7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sirpb1cK7N6K7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sirpb1cK7N6K7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sirpb1cK7N6K7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sirpb1cK7N6K7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.56■■□□□ 1.2
Sirpb1cK7N6K7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sirpb1cK7N6K7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1cK7N6K7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1cK7N6K7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1cK7N6K7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sirpb1cK7N6K7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sirpb1cK7N6K7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sirpb1cK7N6K7 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.5■■□□□ 1.19
Sirpb1cK7N6K7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.49■■□□□ 1.19
Sirpb1cK7N6K7 Zxda-201ENSMUST00000117281 2621 ntBASIC22.49■■□□□ 1.19
Sirpb1cK7N6K7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sirpb1cK7N6K7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1cK7N6K7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1cK7N6K7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1cK7N6K7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1cK7N6K7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1cK7N6K7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Sirpb1cK7N6K7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1cK7N6K7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1cK7N6K7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1cK7N6K7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1cK7N6K7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sirpb1cK7N6K7 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.41■■□□□ 1.18
Sirpb1cK7N6K7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sirpb1cK7N6K7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sirpb1cK7N6K7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sirpb1cK7N6K7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.39■■□□□ 1.17
Sirpb1cK7N6K7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sirpb1cK7N6K7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sirpb1cK7N6K7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sirpb1cK7N6K7 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Sirpb1cK7N6K7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1cK7N6K7 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.35■■□□□ 1.17
Sirpb1cK7N6K7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1cK7N6K7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1cK7N6K7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1cK7N6K7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sirpb1cK7N6K7 Zfp131-205ENSMUST00000223812 663 ntBASIC22.34■■□□□ 1.17
Sirpb1cK7N6K7 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.34■■□□□ 1.17
Sirpb1cK7N6K7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1cK7N6K7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1cK7N6K7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1cK7N6K7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1cK7N6K7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.32■■□□□ 1.16
Sirpb1cK7N6K7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1cK7N6K7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1cK7N6K7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1cK7N6K7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sirpb1cK7N6K7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sirpb1cK7N6K7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1cK7N6K7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1cK7N6K7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Sirpb1cK7N6K7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sirpb1cK7N6K7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sirpb1cK7N6K7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1cK7N6K7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1cK7N6K7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.22■■□□□ 1.15
Sirpb1cK7N6K7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sirpb1cK7N6K7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sirpb1cK7N6K7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Sirpb1cK7N6K7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sirpb1cK7N6K7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sirpb1cK7N6K7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sirpb1cK7N6K7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.18■■□□□ 1.14
Sirpb1cK7N6K7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1cK7N6K7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1cK7N6K7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sirpb1cK7N6K7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sirpb1cK7N6K7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sirpb1cK7N6K7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sirpb1cK7N6K7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1cK7N6K7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1cK7N6K7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sirpb1cK7N6K7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Sirpb1cK7N6K7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.1■■□□□ 1.13
Sirpb1cK7N6K7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sirpb1cK7N6K7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sirpb1cK7N6K7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Sirpb1cK7N6K7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sirpb1cK7N6K7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sirpb1cK7N6K7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sirpb1cK7N6K7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sirpb1cK7N6K7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
Sirpb1cK7N6K7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sirpb1cK7N6K7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sirpb1cK7N6K7 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.04■■□□□ 1.12
Sirpb1cK7N6K7 Gm16148-201ENSMUST00000119653 893 ntBASIC22.04■■□□□ 1.12
Sirpb1cK7N6K7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sirpb1cK7N6K7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sirpb1cK7N6K7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms