Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Atf6F6VAN0 Gm26115-201ENSMUST00000175605 87 ntBASIC26.9■■□□□ 1.9
Atf6F6VAN0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.9■■□□□ 1.9
Atf6F6VAN0 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.88■■□□□ 1.89
Atf6F6VAN0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Atf6F6VAN0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf6F6VAN0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf6F6VAN0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atf6F6VAN0 Gm8109-201ENSMUST00000194076 746 ntBASIC26.86■■□□□ 1.89
Atf6F6VAN0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Atf6F6VAN0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Atf6F6VAN0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Atf6F6VAN0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atf6F6VAN0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atf6F6VAN0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Atf6F6VAN0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Atf6F6VAN0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Atf6F6VAN0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Atf6F6VAN0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Atf6F6VAN0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Atf6F6VAN0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Atf6F6VAN0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.66■■□□□ 1.86
Atf6F6VAN0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Atf6F6VAN0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Atf6F6VAN0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Atf6F6VAN0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Atf6F6VAN0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Atf6F6VAN0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Atf6F6VAN0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Atf6F6VAN0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
Atf6F6VAN0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atf6F6VAN0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atf6F6VAN0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atf6F6VAN0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Atf6F6VAN0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atf6F6VAN0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atf6F6VAN0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.5■■□□□ 1.83
Atf6F6VAN0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atf6F6VAN0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.5■■□□□ 1.83
Atf6F6VAN0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atf6F6VAN0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atf6F6VAN0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Atf6F6VAN0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Atf6F6VAN0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Atf6F6VAN0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Atf6F6VAN0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atf6F6VAN0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Atf6F6VAN0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Atf6F6VAN0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Atf6F6VAN0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
Atf6F6VAN0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atf6F6VAN0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atf6F6VAN0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atf6F6VAN0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atf6F6VAN0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atf6F6VAN0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Atf6F6VAN0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.39■■□□□ 1.81
Atf6F6VAN0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Atf6F6VAN0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.38■■□□□ 1.81
Atf6F6VAN0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Atf6F6VAN0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atf6F6VAN0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.33■■□□□ 1.81
Atf6F6VAN0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atf6F6VAN0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atf6F6VAN0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.32■■□□□ 1.8
Atf6F6VAN0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atf6F6VAN0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atf6F6VAN0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atf6F6VAN0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atf6F6VAN0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atf6F6VAN0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atf6F6VAN0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.26■■□□□ 1.79
Atf6F6VAN0 Peli2-204ENSMUST00000226513 1320 ntBASIC26.26■■□□□ 1.79
Atf6F6VAN0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Atf6F6VAN0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atf6F6VAN0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atf6F6VAN0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Atf6F6VAN0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atf6F6VAN0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Atf6F6VAN0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atf6F6VAN0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.19■■□□□ 1.78
Atf6F6VAN0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atf6F6VAN0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
Atf6F6VAN0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atf6F6VAN0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Atf6F6VAN0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Atf6F6VAN0 Gm24804-201ENSMUST00000174982 85 ntBASIC26.17■■□□□ 1.78
Atf6F6VAN0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Atf6F6VAN0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
Atf6F6VAN0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Atf6F6VAN0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Atf6F6VAN0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Atf6F6VAN0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Atf6F6VAN0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf6F6VAN0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf6F6VAN0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
Atf6F6VAN0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Atf6F6VAN0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Atf6F6VAN0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.09■■□□□ 1.77
Atf6F6VAN0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms