Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C530025M09RikF6RGA8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C530025M09RikF6RGA8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C530025M09RikF6RGA8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C530025M09RikF6RGA8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C530025M09RikF6RGA8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
C530025M09RikF6RGA8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C530025M09RikF6RGA8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C530025M09RikF6RGA8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
C530025M09RikF6RGA8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
C530025M09RikF6RGA8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C530025M09RikF6RGA8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C530025M09RikF6RGA8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
C530025M09RikF6RGA8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C530025M09RikF6RGA8 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.14■□□□□ 0.33
C530025M09RikF6RGA8 Mipep-204ENSMUST00000225043 1548 ntBASIC17.14■□□□□ 0.33
C530025M09RikF6RGA8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C530025M09RikF6RGA8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C530025M09RikF6RGA8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
C530025M09RikF6RGA8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C530025M09RikF6RGA8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C530025M09RikF6RGA8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.11■□□□□ 0.33
C530025M09RikF6RGA8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C530025M09RikF6RGA8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.1■□□□□ 0.33
C530025M09RikF6RGA8 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.08■□□□□ 0.33
C530025M09RikF6RGA8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C530025M09RikF6RGA8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C530025M09RikF6RGA8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C530025M09RikF6RGA8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C530025M09RikF6RGA8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C530025M09RikF6RGA8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C530025M09RikF6RGA8 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.05■□□□□ 0.32
C530025M09RikF6RGA8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C530025M09RikF6RGA8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C530025M09RikF6RGA8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
C530025M09RikF6RGA8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C530025M09RikF6RGA8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C530025M09RikF6RGA8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C530025M09RikF6RGA8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C530025M09RikF6RGA8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
C530025M09RikF6RGA8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
C530025M09RikF6RGA8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C530025M09RikF6RGA8 Zxda-201ENSMUST00000117281 2621 ntBASIC17■□□□□ 0.31
C530025M09RikF6RGA8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C530025M09RikF6RGA8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C530025M09RikF6RGA8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.97■□□□□ 0.31
C530025M09RikF6RGA8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C530025M09RikF6RGA8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C530025M09RikF6RGA8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C530025M09RikF6RGA8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
C530025M09RikF6RGA8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C530025M09RikF6RGA8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C530025M09RikF6RGA8 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.9■□□□□ 0.3
C530025M09RikF6RGA8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C530025M09RikF6RGA8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C530025M09RikF6RGA8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
C530025M09RikF6RGA8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C530025M09RikF6RGA8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C530025M09RikF6RGA8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C530025M09RikF6RGA8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C530025M09RikF6RGA8 Gm25262-201ENSMUST00000174934 133 ntBASIC16.87■□□□□ 0.29
C530025M09RikF6RGA8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C530025M09RikF6RGA8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C530025M09RikF6RGA8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C530025M09RikF6RGA8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C530025M09RikF6RGA8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C530025M09RikF6RGA8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
C530025M09RikF6RGA8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C530025M09RikF6RGA8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
C530025M09RikF6RGA8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C530025M09RikF6RGA8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C530025M09RikF6RGA8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C530025M09RikF6RGA8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C530025M09RikF6RGA8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.78■□□□□ 0.28
C530025M09RikF6RGA8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C530025M09RikF6RGA8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C530025M09RikF6RGA8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C530025M09RikF6RGA8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C530025M09RikF6RGA8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
C530025M09RikF6RGA8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C530025M09RikF6RGA8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
C530025M09RikF6RGA8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.73■□□□□ 0.27
C530025M09RikF6RGA8 Amer2-203ENSMUST00000225247 2662 ntBASIC16.73■□□□□ 0.27
C530025M09RikF6RGA8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C530025M09RikF6RGA8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C530025M09RikF6RGA8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C530025M09RikF6RGA8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C530025M09RikF6RGA8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
C530025M09RikF6RGA8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C530025M09RikF6RGA8 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms