Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Gm3543D3Z235 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Gm3543D3Z235 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm3543D3Z235 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Gm3543D3Z235 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm3543D3Z235 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3543D3Z235 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Gm3543D3Z235 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Gm3543D3Z235 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm3543D3Z235 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm3543D3Z235 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Gm3543D3Z235 Mipep-204ENSMUST00000225043 1548 ntBASIC23.39■■□□□ 1.34
Gm3543D3Z235 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm3543D3Z235 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Gm3543D3Z235 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Gm3543D3Z235 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.31■■□□□ 1.32
Gm3543D3Z235 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.31■■□□□ 1.32
Gm3543D3Z235 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Gm3543D3Z235 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm3543D3Z235 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.29■■□□□ 1.32
Gm3543D3Z235 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Gm3543D3Z235 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm3543D3Z235 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3543D3Z235 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3543D3Z235 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3543D3Z235 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Gm3543D3Z235 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Gm3543D3Z235 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Gm3543D3Z235 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Gm3543D3Z235 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm3543D3Z235 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3543D3Z235 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm3543D3Z235 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm3543D3Z235 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm3543D3Z235 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.2■■□□□ 1.3
Gm3543D3Z235 Peli2-204ENSMUST00000226513 1320 ntBASIC23.19■■□□□ 1.3
Gm3543D3Z235 Gm16148-201ENSMUST00000119653 893 ntBASIC23.19■■□□□ 1.3
Gm3543D3Z235 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.18■■□□□ 1.3
Gm3543D3Z235 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm3543D3Z235 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3543D3Z235 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.15■■□□□ 1.3
Gm3543D3Z235 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Gm3543D3Z235 Zfp131-205ENSMUST00000223812 663 ntBASIC23.14■■□□□ 1.29
Gm3543D3Z235 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Gm3543D3Z235 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3543D3Z235 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3543D3Z235 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.12■■□□□ 1.29
Gm3543D3Z235 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.1■■□□□ 1.29
Gm3543D3Z235 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm3543D3Z235 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm3543D3Z235 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm3543D3Z235 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Gm3543D3Z235 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Gm3543D3Z235 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm3543D3Z235 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm3543D3Z235 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm3543D3Z235 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Gm3543D3Z235 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Gm3543D3Z235 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm3543D3Z235 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm3543D3Z235 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.99■■□□□ 1.27
Gm3543D3Z235 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.98■■□□□ 1.27
Gm3543D3Z235 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm3543D3Z235 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm3543D3Z235 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.96■■□□□ 1.27
Gm3543D3Z235 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.94■■□□□ 1.26
Gm3543D3Z235 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Gm3543D3Z235 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Gm3543D3Z235 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Gm3543D3Z235 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Gm3543D3Z235 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Gm3543D3Z235 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm3543D3Z235 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Gm3543D3Z235 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Gm3543D3Z235 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
Gm3543D3Z235 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.88■■□□□ 1.25
Gm3543D3Z235 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gm3543D3Z235 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm3543D3Z235 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Gm3543D3Z235 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Gm3543D3Z235 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm3543D3Z235 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.85■■□□□ 1.25
Gm3543D3Z235 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Gm3543D3Z235 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Gm3543D3Z235 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
Gm3543D3Z235 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3543D3Z235 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.83■■□□□ 1.25
Gm3543D3Z235 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm3543D3Z235 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.81■■□□□ 1.24
Gm3543D3Z235 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Gm3543D3Z235 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3543D3Z235 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm3543D3Z235 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.76■■□□□ 1.23
Gm3543D3Z235 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3543D3Z235 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3543D3Z235 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Gm3543D3Z235 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Gm3543D3Z235 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3543D3Z235 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm3543D3Z235 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms