Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Gm10093D3YYI8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gm10093D3YYI8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Gm10093D3YYI8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gm10093D3YYI8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Gm10093D3YYI8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Gm10093D3YYI8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Gm10093D3YYI8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Gm10093D3YYI8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Gm10093D3YYI8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Gm10093D3YYI8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Gm10093D3YYI8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Gm10093D3YYI8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.34■■■□□ 2.61
Gm10093D3YYI8 Mipep-204ENSMUST00000225043 1548 ntBASIC31.3■■■□□ 2.6
Gm10093D3YYI8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.29■■■□□ 2.6
Gm10093D3YYI8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Gm10093D3YYI8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Gm10093D3YYI8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Gm10093D3YYI8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Gm10093D3YYI8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Gm10093D3YYI8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Gm10093D3YYI8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Gm10093D3YYI8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Gm10093D3YYI8 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.22■■■□□ 2.59
Gm10093D3YYI8 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.21■■■□□ 2.59
Gm10093D3YYI8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Gm10093D3YYI8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Gm10093D3YYI8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Gm10093D3YYI8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Gm10093D3YYI8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Gm10093D3YYI8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Gm10093D3YYI8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Gm10093D3YYI8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Gm10093D3YYI8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Gm10093D3YYI8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Gm10093D3YYI8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.12■■■□□ 2.57
Gm10093D3YYI8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gm10093D3YYI8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Gm10093D3YYI8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Gm10093D3YYI8 Zxda-201ENSMUST00000117281 2621 ntBASIC31.1■■■□□ 2.57
Gm10093D3YYI8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Gm10093D3YYI8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Gm10093D3YYI8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Gm10093D3YYI8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Gm10093D3YYI8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.02■■■□□ 2.56
Gm10093D3YYI8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Gm10093D3YYI8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Gm10093D3YYI8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Gm10093D3YYI8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Gm10093D3YYI8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Gm10093D3YYI8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
Gm10093D3YYI8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.93■■■□□ 2.54
Gm10093D3YYI8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Gm10093D3YYI8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Gm10093D3YYI8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Gm10093D3YYI8 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.91■■■□□ 2.54
Gm10093D3YYI8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Gm10093D3YYI8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Gm10093D3YYI8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Gm10093D3YYI8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Gm10093D3YYI8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Gm10093D3YYI8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Gm10093D3YYI8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Gm10093D3YYI8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Gm10093D3YYI8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Gm10093D3YYI8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Gm10093D3YYI8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Gm10093D3YYI8 Gm25262-201ENSMUST00000174934 133 ntBASIC30.74■■■□□ 2.51
Gm10093D3YYI8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.73■■■□□ 2.51
Gm10093D3YYI8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Gm10093D3YYI8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gm10093D3YYI8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Gm10093D3YYI8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.69■■■□□ 2.5
Gm10093D3YYI8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Gm10093D3YYI8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Gm10093D3YYI8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.63■■■□□ 2.49
Gm10093D3YYI8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Gm10093D3YYI8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Gm10093D3YYI8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gm10093D3YYI8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gm10093D3YYI8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gm10093D3YYI8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gm10093D3YYI8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Gm10093D3YYI8 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.59■■■□□ 2.49
Gm10093D3YYI8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Gm10093D3YYI8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Gm10093D3YYI8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Gm10093D3YYI8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Gm10093D3YYI8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Gm10093D3YYI8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Gm10093D3YYI8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.53■■■□□ 2.48
Gm10093D3YYI8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Gm10093D3YYI8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
Gm10093D3YYI8 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.5■■■□□ 2.47
Gm10093D3YYI8 Amer2-203ENSMUST00000225247 2662 ntBASIC30.5■■■□□ 2.47
Gm10093D3YYI8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gm10093D3YYI8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Gm10093D3YYI8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gm10093D3YYI8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Gm10093D3YYI8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms