Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.34■■□□□ 1.81
Gm28729A0A1B0GSW2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Gm28729A0A1B0GSW2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Gm28729A0A1B0GSW2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Gm28729A0A1B0GSW2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Gm28729A0A1B0GSW2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Gm28729A0A1B0GSW2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Gm28729A0A1B0GSW2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Gm28729A0A1B0GSW2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.25■■□□□ 1.79
Gm28729A0A1B0GSW2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Gm28729A0A1B0GSW2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Gm28729A0A1B0GSW2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.23■■□□□ 1.79
Gm28729A0A1B0GSW2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Gm28729A0A1B0GSW2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Gm28729A0A1B0GSW2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Gm28729A0A1B0GSW2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Gm28729A0A1B0GSW2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Gm28729A0A1B0GSW2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm28729A0A1B0GSW2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Gm28729A0A1B0GSW2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Gm28729A0A1B0GSW2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Gm28729A0A1B0GSW2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Gm28729A0A1B0GSW2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Gm28729A0A1B0GSW2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.15■■□□□ 1.78
Gm28729A0A1B0GSW2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.13■■□□□ 1.77
Gm28729A0A1B0GSW2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.11■■□□□ 1.77
Gm28729A0A1B0GSW2 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.11■■□□□ 1.77
Gm28729A0A1B0GSW2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Gm28729A0A1B0GSW2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.1■■□□□ 1.77
Gm28729A0A1B0GSW2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Gm28729A0A1B0GSW2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Gm28729A0A1B0GSW2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Gm28729A0A1B0GSW2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Gm28729A0A1B0GSW2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Gm28729A0A1B0GSW2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Gm28729A0A1B0GSW2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.02■■□□□ 1.76
Gm28729A0A1B0GSW2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Gm28729A0A1B0GSW2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26■■□□□ 1.75
Gm28729A0A1B0GSW2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Gm28729A0A1B0GSW2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.95■■□□□ 1.74
Gm28729A0A1B0GSW2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Gm28729A0A1B0GSW2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Gm28729A0A1B0GSW2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.91■■□□□ 1.74
Gm28729A0A1B0GSW2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Gm28729A0A1B0GSW2 Gm45855-201ENSMUST00000212546 880 ntBASIC25.9■■□□□ 1.74
Gm28729A0A1B0GSW2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Gm28729A0A1B0GSW2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Gm28729A0A1B0GSW2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Gm28729A0A1B0GSW2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Gm28729A0A1B0GSW2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Gm28729A0A1B0GSW2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Gm28729A0A1B0GSW2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Gm28729A0A1B0GSW2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Gm28729A0A1B0GSW2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Gm28729A0A1B0GSW2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Gm28729A0A1B0GSW2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Gm28729A0A1B0GSW2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.77■■□□□ 1.72
Gm28729A0A1B0GSW2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Gm28729A0A1B0GSW2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Gm28729A0A1B0GSW2 Gm9397-201ENSMUST00000200125 605 ntBASIC25.76■■□□□ 1.71
Gm28729A0A1B0GSW2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Gm28729A0A1B0GSW2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Gm28729A0A1B0GSW2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Gm28729A0A1B0GSW2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Gm28729A0A1B0GSW2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Gm28729A0A1B0GSW2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.72■■□□□ 1.71
Gm28729A0A1B0GSW2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Gm28729A0A1B0GSW2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Gm28729A0A1B0GSW2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.7■■□□□ 1.71
Gm28729A0A1B0GSW2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.7■■□□□ 1.7
Gm28729A0A1B0GSW2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
Gm28729A0A1B0GSW2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Gm28729A0A1B0GSW2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Gm28729A0A1B0GSW2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.68■■□□□ 1.7
Gm28729A0A1B0GSW2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Gm28729A0A1B0GSW2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Gm28729A0A1B0GSW2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.66■■□□□ 1.7
Gm28729A0A1B0GSW2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Gm28729A0A1B0GSW2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gm28729A0A1B0GSW2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gm28729A0A1B0GSW2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.63■■□□□ 1.69
Gm28729A0A1B0GSW2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gm28729A0A1B0GSW2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Gm28729A0A1B0GSW2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
Gm28729A0A1B0GSW2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Gm28729A0A1B0GSW2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm28729A0A1B0GSW2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm28729A0A1B0GSW2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm28729A0A1B0GSW2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm28729A0A1B0GSW2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm28729A0A1B0GSW2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Gm28729A0A1B0GSW2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.57■■□□□ 1.68
Gm28729A0A1B0GSW2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Gm28729A0A1B0GSW2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Gm28729A0A1B0GSW2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.54■■□□□ 1.68
Gm28729A0A1B0GSW2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Gm28729A0A1B0GSW2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.54■■□□□ 1.68
Gm28729A0A1B0GSW2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Gm28729A0A1B0GSW2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm28729A0A1B0GSW2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms