Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lnp1A0A1B0GSK3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lnp1A0A1B0GSK3 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.74■■□□□ 1.07
Lnp1A0A1B0GSK3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lnp1A0A1B0GSK3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lnp1A0A1B0GSK3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.72■■□□□ 1.07
Lnp1A0A1B0GSK3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lnp1A0A1B0GSK3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.69■■□□□ 1.06
Lnp1A0A1B0GSK3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lnp1A0A1B0GSK3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lnp1A0A1B0GSK3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Lnp1A0A1B0GSK3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lnp1A0A1B0GSK3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lnp1A0A1B0GSK3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lnp1A0A1B0GSK3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lnp1A0A1B0GSK3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lnp1A0A1B0GSK3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lnp1A0A1B0GSK3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lnp1A0A1B0GSK3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lnp1A0A1B0GSK3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lnp1A0A1B0GSK3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Lnp1A0A1B0GSK3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lnp1A0A1B0GSK3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.5■■□□□ 1.03
Lnp1A0A1B0GSK3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lnp1A0A1B0GSK3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lnp1A0A1B0GSK3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lnp1A0A1B0GSK3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lnp1A0A1B0GSK3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Lnp1A0A1B0GSK3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lnp1A0A1B0GSK3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lnp1A0A1B0GSK3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lnp1A0A1B0GSK3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lnp1A0A1B0GSK3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lnp1A0A1B0GSK3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.35■■□□□ 1.01
Lnp1A0A1B0GSK3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.34■■□□□ 1.01
Lnp1A0A1B0GSK3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lnp1A0A1B0GSK3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Lnp1A0A1B0GSK3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lnp1A0A1B0GSK3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lnp1A0A1B0GSK3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lnp1A0A1B0GSK3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Peli2-204ENSMUST00000226513 1320 ntBASIC21.27■□□□□ 0.99
Lnp1A0A1B0GSK3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lnp1A0A1B0GSK3 Gm24804-201ENSMUST00000174982 85 ntBASIC21.23■□□□□ 0.99
Lnp1A0A1B0GSK3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lnp1A0A1B0GSK3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lnp1A0A1B0GSK3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lnp1A0A1B0GSK3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lnp1A0A1B0GSK3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lnp1A0A1B0GSK3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lnp1A0A1B0GSK3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lnp1A0A1B0GSK3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lnp1A0A1B0GSK3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lnp1A0A1B0GSK3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.07■□□□□ 0.96
Lnp1A0A1B0GSK3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Lnp1A0A1B0GSK3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms