Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm3880A0A1B0GSB3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm3880A0A1B0GSB3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3880A0A1B0GSB3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm3880A0A1B0GSB3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm3880A0A1B0GSB3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm3880A0A1B0GSB3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Gm3880A0A1B0GSB3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC13.04□□□□□ -0.32
Gm3880A0A1B0GSB3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm3880A0A1B0GSB3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm3880A0A1B0GSB3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gm3880A0A1B0GSB3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm3880A0A1B0GSB3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm3880A0A1B0GSB3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gm3880A0A1B0GSB3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gm3880A0A1B0GSB3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm3880A0A1B0GSB3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm3880A0A1B0GSB3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm3880A0A1B0GSB3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Gm3880A0A1B0GSB3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Gm3880A0A1B0GSB3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm3880A0A1B0GSB3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm3880A0A1B0GSB3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gm3880A0A1B0GSB3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm3880A0A1B0GSB3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm3880A0A1B0GSB3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3880A0A1B0GSB3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3880A0A1B0GSB3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm3880A0A1B0GSB3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm3880A0A1B0GSB3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3880A0A1B0GSB3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm3880A0A1B0GSB3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm3880A0A1B0GSB3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Gm3880A0A1B0GSB3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3880A0A1B0GSB3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm3880A0A1B0GSB3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3880A0A1B0GSB3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm3880A0A1B0GSB3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm3880A0A1B0GSB3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3880A0A1B0GSB3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm3880A0A1B0GSB3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gm3880A0A1B0GSB3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm3880A0A1B0GSB3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm3880A0A1B0GSB3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm3880A0A1B0GSB3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm3880A0A1B0GSB3 Gm25239-201ENSMUST00000174915 86 ntBASIC12.9□□□□□ -0.34
Gm3880A0A1B0GSB3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm3880A0A1B0GSB3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm3880A0A1B0GSB3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm3880A0A1B0GSB3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm3880A0A1B0GSB3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Gm3880A0A1B0GSB3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm3880A0A1B0GSB3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm3880A0A1B0GSB3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm3880A0A1B0GSB3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm3880A0A1B0GSB3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm3880A0A1B0GSB3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm3880A0A1B0GSB3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm3880A0A1B0GSB3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Gm3880A0A1B0GSB3 Gm9905-201ENSMUST00000065740 1845 ntBASIC12.83□□□□□ -0.35
Gm3880A0A1B0GSB3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3880A0A1B0GSB3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3880A0A1B0GSB3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm3880A0A1B0GSB3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm3880A0A1B0GSB3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Gm3880A0A1B0GSB3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm3880A0A1B0GSB3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3880A0A1B0GSB3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3880A0A1B0GSB3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC12.81□□□□□ -0.36
Gm3880A0A1B0GSB3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC12.8□□□□□ -0.36
Gm3880A0A1B0GSB3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3880A0A1B0GSB3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm3880A0A1B0GSB3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3880A0A1B0GSB3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3880A0A1B0GSB3 Gm6206-201ENSMUST00000133472 2199 ntBASIC12.79□□□□□ -0.36
Gm3880A0A1B0GSB3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3880A0A1B0GSB3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3880A0A1B0GSB3 Gm2415-204ENSMUST00000190235 2004 ntBASIC12.78□□□□□ -0.36
Gm3880A0A1B0GSB3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3880A0A1B0GSB3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3880A0A1B0GSB3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3880A0A1B0GSB3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm3880A0A1B0GSB3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm3880A0A1B0GSB3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm3880A0A1B0GSB3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm3880A0A1B0GSB3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Gm3880A0A1B0GSB3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm3880A0A1B0GSB3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm3880A0A1B0GSB3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm3880A0A1B0GSB3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm3880A0A1B0GSB3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3880A0A1B0GSB3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3880A0A1B0GSB3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm3880A0A1B0GSB3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms