Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.64■□□□□ 0.89
Vma21-psA0A140T8R2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.61■□□□□ 0.89
Vma21-psA0A140T8R2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vma21-psA0A140T8R2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vma21-psA0A140T8R2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Vma21-psA0A140T8R2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vma21-psA0A140T8R2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Vma21-psA0A140T8R2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.58■□□□□ 0.88
Vma21-psA0A140T8R2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21-psA0A140T8R2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vma21-psA0A140T8R2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.54■□□□□ 0.88
Vma21-psA0A140T8R2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vma21-psA0A140T8R2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.53■□□□□ 0.88
Vma21-psA0A140T8R2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vma21-psA0A140T8R2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vma21-psA0A140T8R2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vma21-psA0A140T8R2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vma21-psA0A140T8R2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vma21-psA0A140T8R2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vma21-psA0A140T8R2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vma21-psA0A140T8R2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vma21-psA0A140T8R2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vma21-psA0A140T8R2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Vma21-psA0A140T8R2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vma21-psA0A140T8R2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.45■□□□□ 0.86
Vma21-psA0A140T8R2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vma21-psA0A140T8R2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.43■□□□□ 0.86
Vma21-psA0A140T8R2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vma21-psA0A140T8R2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vma21-psA0A140T8R2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Vma21-psA0A140T8R2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vma21-psA0A140T8R2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vma21-psA0A140T8R2 Gm27322-201ENSMUST00000184007 104 ntBASIC20.41■□□□□ 0.86
Vma21-psA0A140T8R2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vma21-psA0A140T8R2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.41■□□□□ 0.86
Vma21-psA0A140T8R2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Vma21-psA0A140T8R2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vma21-psA0A140T8R2 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.39■□□□□ 0.85
Vma21-psA0A140T8R2 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.38■□□□□ 0.85
Vma21-psA0A140T8R2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.37■□□□□ 0.85
Vma21-psA0A140T8R2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vma21-psA0A140T8R2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vma21-psA0A140T8R2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vma21-psA0A140T8R2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vma21-psA0A140T8R2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vma21-psA0A140T8R2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Vma21-psA0A140T8R2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vma21-psA0A140T8R2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Vma21-psA0A140T8R2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vma21-psA0A140T8R2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.33■□□□□ 0.85
Vma21-psA0A140T8R2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Vma21-psA0A140T8R2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vma21-psA0A140T8R2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vma21-psA0A140T8R2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vma21-psA0A140T8R2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vma21-psA0A140T8R2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vma21-psA0A140T8R2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vma21-psA0A140T8R2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vma21-psA0A140T8R2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vma21-psA0A140T8R2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vma21-psA0A140T8R2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vma21-psA0A140T8R2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vma21-psA0A140T8R2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vma21-psA0A140T8R2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vma21-psA0A140T8R2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vma21-psA0A140T8R2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vma21-psA0A140T8R2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vma21-psA0A140T8R2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vma21-psA0A140T8R2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vma21-psA0A140T8R2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vma21-psA0A140T8R2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vma21-psA0A140T8R2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vma21-psA0A140T8R2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vma21-psA0A140T8R2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vma21-psA0A140T8R2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vma21-psA0A140T8R2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vma21-psA0A140T8R2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vma21-psA0A140T8R2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vma21-psA0A140T8R2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vma21-psA0A140T8R2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vma21-psA0A140T8R2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vma21-psA0A140T8R2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vma21-psA0A140T8R2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vma21-psA0A140T8R2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vma21-psA0A140T8R2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vma21-psA0A140T8R2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vma21-psA0A140T8R2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vma21-psA0A140T8R2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vma21-psA0A140T8R2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vma21-psA0A140T8R2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vma21-psA0A140T8R2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Vma21-psA0A140T8R2 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.09■□□□□ 0.81
Vma21-psA0A140T8R2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vma21-psA0A140T8R2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vma21-psA0A140T8R2 Gm26115-201ENSMUST00000175605 87 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms