Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rpl23a-ps3A0A140T8M7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Zxda-201ENSMUST00000117281 2621 ntBASIC21.48■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.38■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.34■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rpl23a-ps3A0A140T8M7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpl23a-ps3A0A140T8M7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rpl23a-ps3A0A140T8M7 Gm27322-201ENSMUST00000184007 104 ntBASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rpl23a-ps3A0A140T8M7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rpl23a-ps3A0A140T8M7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.24■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.96■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Gm24804-201ENSMUST00000174982 85 ntBASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms