Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rpl23a-ps3A0A140T8M7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Zxda-201ENSMUST00000117281 2621 ntBASIC21.48■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
Rpl23a-ps3A0A140T8M7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpl23a-ps3A0A140T8M7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.38■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.34■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpl23a-ps3A0A140T8M7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rpl23a-ps3A0A140T8M7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rpl23a-ps3A0A140T8M7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rpl23a-ps3A0A140T8M7 Gm27322-201ENSMUST00000184007 104 ntBASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rpl23a-ps3A0A140T8M7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rpl23a-ps3A0A140T8M7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rpl23a-ps3A0A140T8M7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.24■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Rpl23a-ps3A0A140T8M7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpl23a-ps3A0A140T8M7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl23a-ps3A0A140T8M7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl23a-ps3A0A140T8M7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.96■□□□□ 0.95
Rpl23a-ps3A0A140T8M7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.94■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Gm24804-201ENSMUST00000174982 85 ntBASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms