Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm5580A0A0N4SVP8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Gm5580A0A0N4SVP8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Gm5580A0A0N4SVP8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Gm5580A0A0N4SVP8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Gm5580A0A0N4SVP8 Mipep-204ENSMUST00000225043 1548 ntBASIC28.47■■■□□ 2.15
Gm5580A0A0N4SVP8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Gm5580A0A0N4SVP8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
Gm5580A0A0N4SVP8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.45■■■□□ 2.14
Gm5580A0A0N4SVP8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Gm5580A0A0N4SVP8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gm5580A0A0N4SVP8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Gm5580A0A0N4SVP8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Gm5580A0A0N4SVP8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Gm5580A0A0N4SVP8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Gm5580A0A0N4SVP8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.37■■■□□ 2.13
Gm5580A0A0N4SVP8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Gm5580A0A0N4SVP8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gm5580A0A0N4SVP8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Gm5580A0A0N4SVP8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Gm5580A0A0N4SVP8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Gm5580A0A0N4SVP8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Gm5580A0A0N4SVP8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Gm5580A0A0N4SVP8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Gm5580A0A0N4SVP8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gm5580A0A0N4SVP8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gm5580A0A0N4SVP8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Gm5580A0A0N4SVP8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Gm5580A0A0N4SVP8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Gm5580A0A0N4SVP8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gm5580A0A0N4SVP8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.16■■■□□ 2.1
Gm5580A0A0N4SVP8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gm5580A0A0N4SVP8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Gm5580A0A0N4SVP8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm5580A0A0N4SVP8 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.11■■■□□ 2.09
Gm5580A0A0N4SVP8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.11■■■□□ 2.09
Gm5580A0A0N4SVP8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm5580A0A0N4SVP8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm5580A0A0N4SVP8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm5580A0A0N4SVP8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Gm5580A0A0N4SVP8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm5580A0A0N4SVP8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Gm5580A0A0N4SVP8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Gm5580A0A0N4SVP8 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.06■■■□□ 2.08
Gm5580A0A0N4SVP8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
Gm5580A0A0N4SVP8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Gm5580A0A0N4SVP8 Zxda-201ENSMUST00000117281 2621 ntBASIC28.03■■■□□ 2.08
Gm5580A0A0N4SVP8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.02■■■□□ 2.08
Gm5580A0A0N4SVP8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
Gm5580A0A0N4SVP8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.99■■■□□ 2.07
Gm5580A0A0N4SVP8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.98■■■□□ 2.07
Gm5580A0A0N4SVP8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.98■■■□□ 2.07
Gm5580A0A0N4SVP8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Gm5580A0A0N4SVP8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Gm5580A0A0N4SVP8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Gm5580A0A0N4SVP8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.96■■■□□ 2.07
Gm5580A0A0N4SVP8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Gm5580A0A0N4SVP8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Gm5580A0A0N4SVP8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Gm5580A0A0N4SVP8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Gm5580A0A0N4SVP8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Gm5580A0A0N4SVP8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.89■■■□□ 2.06
Gm5580A0A0N4SVP8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
Gm5580A0A0N4SVP8 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.87■■■□□ 2.05
Gm5580A0A0N4SVP8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Gm5580A0A0N4SVP8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Gm5580A0A0N4SVP8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Gm5580A0A0N4SVP8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Gm5580A0A0N4SVP8 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.84■■■□□ 2.05
Gm5580A0A0N4SVP8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Gm5580A0A0N4SVP8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
Gm5580A0A0N4SVP8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Gm5580A0A0N4SVP8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Gm5580A0A0N4SVP8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Gm5580A0A0N4SVP8 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.82■■■□□ 2.04
Gm5580A0A0N4SVP8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Gm5580A0A0N4SVP8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gm5580A0A0N4SVP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Gm5580A0A0N4SVP8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
Gm5580A0A0N4SVP8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
Gm5580A0A0N4SVP8 Gm27322-201ENSMUST00000184007 104 ntBASIC27.77■■■□□ 2.04
Gm5580A0A0N4SVP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Gm5580A0A0N4SVP8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm5580A0A0N4SVP8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm5580A0A0N4SVP8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Gm5580A0A0N4SVP8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Gm5580A0A0N4SVP8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Gm5580A0A0N4SVP8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Gm5580A0A0N4SVP8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.73■■■□□ 2.03
Gm5580A0A0N4SVP8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Gm5580A0A0N4SVP8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Gm5580A0A0N4SVP8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Gm5580A0A0N4SVP8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.7■■■□□ 2.03
Gm5580A0A0N4SVP8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Gm5580A0A0N4SVP8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Gm5580A0A0N4SVP8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Gm5580A0A0N4SVP8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Gm5580A0A0N4SVP8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Gm5580A0A0N4SVP8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Gm5580A0A0N4SVP8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms