Protein–RNA interactions for Protein: A0A0N4SV92

Duxf3, Double homeobox family member 3, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Duxf3A0A0N4SV92 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
Duxf3A0A0N4SV92 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Duxf3A0A0N4SV92 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Duxf3A0A0N4SV92 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Duxf3A0A0N4SV92 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.94■■■□□ 2.86
Duxf3A0A0N4SV92 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.93■■■□□ 2.86
Duxf3A0A0N4SV92 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Duxf3A0A0N4SV92 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.92■■■□□ 2.86
Duxf3A0A0N4SV92 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Duxf3A0A0N4SV92 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Duxf3A0A0N4SV92 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.89■■■□□ 2.86
Duxf3A0A0N4SV92 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
Duxf3A0A0N4SV92 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Duxf3A0A0N4SV92 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.87■■■□□ 2.85
Duxf3A0A0N4SV92 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.86■■■□□ 2.85
Duxf3A0A0N4SV92 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Duxf3A0A0N4SV92 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
Duxf3A0A0N4SV92 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
Duxf3A0A0N4SV92 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
Duxf3A0A0N4SV92 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Duxf3A0A0N4SV92 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Duxf3A0A0N4SV92 Gm27322-201ENSMUST00000184007 104 ntBASIC32.81■■■□□ 2.84
Duxf3A0A0N4SV92 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Duxf3A0A0N4SV92 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Duxf3A0A0N4SV92 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
Duxf3A0A0N4SV92 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Duxf3A0A0N4SV92 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.76■■■□□ 2.83
Duxf3A0A0N4SV92 AC166822.3-201ENSMUST00000227394 661 ntBASIC32.74■■■□□ 2.83
Duxf3A0A0N4SV92 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Duxf3A0A0N4SV92 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Duxf3A0A0N4SV92 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Duxf3A0A0N4SV92 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Duxf3A0A0N4SV92 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Duxf3A0A0N4SV92 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Duxf3A0A0N4SV92 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.66■■■□□ 2.82
Duxf3A0A0N4SV92 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Duxf3A0A0N4SV92 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Duxf3A0A0N4SV92 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Duxf3A0A0N4SV92 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
Duxf3A0A0N4SV92 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Duxf3A0A0N4SV92 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
Duxf3A0A0N4SV92 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Duxf3A0A0N4SV92 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Duxf3A0A0N4SV92 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Duxf3A0A0N4SV92 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Duxf3A0A0N4SV92 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Duxf3A0A0N4SV92 Gm8109-201ENSMUST00000194076 746 ntBASIC32.54■■■□□ 2.8
Duxf3A0A0N4SV92 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Duxf3A0A0N4SV92 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.52■■■□□ 2.8
Duxf3A0A0N4SV92 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Duxf3A0A0N4SV92 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Duxf3A0A0N4SV92 Gm26115-201ENSMUST00000175605 87 ntBASIC32.48■■■□□ 2.79
Duxf3A0A0N4SV92 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Duxf3A0A0N4SV92 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Duxf3A0A0N4SV92 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Duxf3A0A0N4SV92 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Duxf3A0A0N4SV92 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Duxf3A0A0N4SV92 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Duxf3A0A0N4SV92 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Duxf3A0A0N4SV92 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Duxf3A0A0N4SV92 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
Duxf3A0A0N4SV92 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
Duxf3A0A0N4SV92 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Duxf3A0A0N4SV92 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Duxf3A0A0N4SV92 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Duxf3A0A0N4SV92 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Duxf3A0A0N4SV92 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.37■■■□□ 2.77
Duxf3A0A0N4SV92 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Duxf3A0A0N4SV92 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Duxf3A0A0N4SV92 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Duxf3A0A0N4SV92 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
Duxf3A0A0N4SV92 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Duxf3A0A0N4SV92 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
Duxf3A0A0N4SV92 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Duxf3A0A0N4SV92 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Duxf3A0A0N4SV92 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
Duxf3A0A0N4SV92 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.2■■■□□ 2.75
Duxf3A0A0N4SV92 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Duxf3A0A0N4SV92 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Duxf3A0A0N4SV92 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.18■■■□□ 2.74
Duxf3A0A0N4SV92 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.17■■■□□ 2.74
Duxf3A0A0N4SV92 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Duxf3A0A0N4SV92 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Duxf3A0A0N4SV92 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Duxf3A0A0N4SV92 Zxda-201ENSMUST00000117281 2621 ntBASIC32.13■■■□□ 2.73
Duxf3A0A0N4SV92 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Duxf3A0A0N4SV92 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Duxf3A0A0N4SV92 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Duxf3A0A0N4SV92 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Duxf3A0A0N4SV92 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
Duxf3A0A0N4SV92 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Duxf3A0A0N4SV92 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Duxf3A0A0N4SV92 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.1■■■□□ 2.73
Duxf3A0A0N4SV92 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.1■■■□□ 2.73
Duxf3A0A0N4SV92 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Duxf3A0A0N4SV92 Peli2-204ENSMUST00000226513 1320 ntBASIC32.08■■■□□ 2.73
Duxf3A0A0N4SV92 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Duxf3A0A0N4SV92 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Duxf3A0A0N4SV92 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Duxf3A0A0N4SV92 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.06■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms