Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav7-5A0A0G2JFX6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav7-5A0A0G2JFX6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav7-5A0A0G2JFX6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav7-5A0A0G2JFX6 Gm24804-201ENSMUST00000174982 85 ntBASIC20.37■□□□□ 0.85
Trav7-5A0A0G2JFX6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav7-5A0A0G2JFX6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav7-5A0A0G2JFX6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav7-5A0A0G2JFX6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trav7-5A0A0G2JFX6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav7-5A0A0G2JFX6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav7-5A0A0G2JFX6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav7-5A0A0G2JFX6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.29■□□□□ 0.84
Trav7-5A0A0G2JFX6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav7-5A0A0G2JFX6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav7-5A0A0G2JFX6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav7-5A0A0G2JFX6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.27■□□□□ 0.84
Trav7-5A0A0G2JFX6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav7-5A0A0G2JFX6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7-5A0A0G2JFX6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7-5A0A0G2JFX6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav7-5A0A0G2JFX6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7-5A0A0G2JFX6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav7-5A0A0G2JFX6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trav7-5A0A0G2JFX6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav7-5A0A0G2JFX6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trav7-5A0A0G2JFX6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav7-5A0A0G2JFX6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav7-5A0A0G2JFX6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav7-5A0A0G2JFX6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trav7-5A0A0G2JFX6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.18■□□□□ 0.82
Trav7-5A0A0G2JFX6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav7-5A0A0G2JFX6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav7-5A0A0G2JFX6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav7-5A0A0G2JFX6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav7-5A0A0G2JFX6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav7-5A0A0G2JFX6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav7-5A0A0G2JFX6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav7-5A0A0G2JFX6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav7-5A0A0G2JFX6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav7-5A0A0G2JFX6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Trav7-5A0A0G2JFX6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trav7-5A0A0G2JFX6 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.13■□□□□ 0.81
Trav7-5A0A0G2JFX6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav7-5A0A0G2JFX6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7-5A0A0G2JFX6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7-5A0A0G2JFX6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav7-5A0A0G2JFX6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav7-5A0A0G2JFX6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.08■□□□□ 0.81
Trav7-5A0A0G2JFX6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav7-5A0A0G2JFX6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav7-5A0A0G2JFX6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav7-5A0A0G2JFX6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.05■□□□□ 0.8
Trav7-5A0A0G2JFX6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav7-5A0A0G2JFX6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trav7-5A0A0G2JFX6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7-5A0A0G2JFX6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7-5A0A0G2JFX6 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.01■□□□□ 0.79
Trav7-5A0A0G2JFX6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav7-5A0A0G2JFX6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7-5A0A0G2JFX6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav7-5A0A0G2JFX6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trav7-5A0A0G2JFX6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav7-5A0A0G2JFX6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Trav7-5A0A0G2JFX6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav7-5A0A0G2JFX6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav7-5A0A0G2JFX6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav7-5A0A0G2JFX6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav7-5A0A0G2JFX6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav7-5A0A0G2JFX6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.94■□□□□ 0.78
Trav7-5A0A0G2JFX6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.93■□□□□ 0.78
Trav7-5A0A0G2JFX6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7-5A0A0G2JFX6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7-5A0A0G2JFX6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav7-5A0A0G2JFX6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav7-5A0A0G2JFX6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7-5A0A0G2JFX6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7-5A0A0G2JFX6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7-5A0A0G2JFX6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.89■□□□□ 0.77
Trav7-5A0A0G2JFX6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Trav7-5A0A0G2JFX6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav7-5A0A0G2JFX6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav7-5A0A0G2JFX6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7-5A0A0G2JFX6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.86■□□□□ 0.77
Trav7-5A0A0G2JFX6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Trav7-5A0A0G2JFX6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav7-5A0A0G2JFX6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav7-5A0A0G2JFX6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trav7-5A0A0G2JFX6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav7-5A0A0G2JFX6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7-5A0A0G2JFX6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7-5A0A0G2JFX6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7-5A0A0G2JFX6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav7-5A0A0G2JFX6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trav7-5A0A0G2JFX6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav7-5A0A0G2JFX6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav7-5A0A0G2JFX6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav7-5A0A0G2JFX6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav7-5A0A0G2JFX6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav7-5A0A0G2JFX6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms