Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ighv9-2A0A0B4J1J4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv9-2A0A0B4J1J4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv9-2A0A0B4J1J4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv9-2A0A0B4J1J4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv9-2A0A0B4J1J4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.94■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv9-2A0A0B4J1J4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv9-2A0A0B4J1J4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv9-2A0A0B4J1J4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv9-2A0A0B4J1J4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv9-2A0A0B4J1J4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ighv9-2A0A0B4J1J4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv9-2A0A0B4J1J4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv9-2A0A0B4J1J4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.72■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv9-2A0A0B4J1J4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.68■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ighv9-2A0A0B4J1J4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.63■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Peli2-204ENSMUST00000226513 1320 ntBASIC21.58■■□□□ 1.05
Ighv9-2A0A0B4J1J4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Gm24804-201ENSMUST00000174982 85 ntBASIC21.55■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.53■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ighv9-2A0A0B4J1J4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ighv9-2A0A0B4J1J4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.47■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.46■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Ighv9-2A0A0B4J1J4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.4■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-2A0A0B4J1J4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv9-2A0A0B4J1J4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.39■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ighv9-2A0A0B4J1J4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms