Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Zfp131-205ENSMUST00000223812 663 ntBASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.61■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.5■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.49■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Zxda-201ENSMUST00000117281 2621 ntBASIC22.49■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.39■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sirpb1bA0A0A6YXN8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.37■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1bA0A0A6YXN8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Gm16148-201ENSMUST00000119653 893 ntBASIC22.26■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.22■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms