Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sirpb1bA0A0A6YXN8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Zfp131-205ENSMUST00000223812 663 ntBASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.61■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sirpb1bA0A0A6YXN8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sirpb1bA0A0A6YXN8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sirpb1bA0A0A6YXN8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.5■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.49■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Zxda-201ENSMUST00000117281 2621 ntBASIC22.49■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sirpb1bA0A0A6YXN8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sirpb1bA0A0A6YXN8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.39■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sirpb1bA0A0A6YXN8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.37■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.36■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.34■■□□□ 1.17
Sirpb1bA0A0A6YXN8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1bA0A0A6YXN8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sirpb1bA0A0A6YXN8 Gm16148-201ENSMUST00000119653 893 ntBASIC22.26■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.22■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sirpb1bA0A0A6YXN8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sirpb1bA0A0A6YXN8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sirpb1bA0A0A6YXN8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sirpb1bA0A0A6YXN8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms