Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6d-7A0A075B6B0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6d-7A0A075B6B0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-7A0A075B6B0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6d-7A0A075B6B0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav6d-7A0A075B6B0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6d-7A0A075B6B0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6d-7A0A075B6B0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6d-7A0A075B6B0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6d-7A0A075B6B0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.84■□□□□ 0.77
Trav6d-7A0A075B6B0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6d-7A0A075B6B0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6d-7A0A075B6B0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6d-7A0A075B6B0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6d-7A0A075B6B0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6d-7A0A075B6B0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trav6d-7A0A075B6B0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6d-7A0A075B6B0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6d-7A0A075B6B0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav6d-7A0A075B6B0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav6d-7A0A075B6B0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav6d-7A0A075B6B0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.7■□□□□ 0.74
Trav6d-7A0A075B6B0 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.7■□□□□ 0.74
Trav6d-7A0A075B6B0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav6d-7A0A075B6B0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav6d-7A0A075B6B0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6d-7A0A075B6B0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6d-7A0A075B6B0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav6d-7A0A075B6B0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trav6d-7A0A075B6B0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6d-7A0A075B6B0 Gm24804-201ENSMUST00000174982 85 ntBASIC19.68■□□□□ 0.74
Trav6d-7A0A075B6B0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6d-7A0A075B6B0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav6d-7A0A075B6B0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.67■□□□□ 0.74
Trav6d-7A0A075B6B0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.67■□□□□ 0.74
Trav6d-7A0A075B6B0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6d-7A0A075B6B0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav6d-7A0A075B6B0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6d-7A0A075B6B0 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.65■□□□□ 0.74
Trav6d-7A0A075B6B0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav6d-7A0A075B6B0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav6d-7A0A075B6B0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6d-7A0A075B6B0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6d-7A0A075B6B0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6d-7A0A075B6B0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6d-7A0A075B6B0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav6d-7A0A075B6B0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav6d-7A0A075B6B0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6d-7A0A075B6B0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6d-7A0A075B6B0 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.59■□□□□ 0.73
Trav6d-7A0A075B6B0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav6d-7A0A075B6B0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
Trav6d-7A0A075B6B0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.56■□□□□ 0.72
Trav6d-7A0A075B6B0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6d-7A0A075B6B0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav6d-7A0A075B6B0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6d-7A0A075B6B0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav6d-7A0A075B6B0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-7A0A075B6B0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-7A0A075B6B0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6d-7A0A075B6B0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-7A0A075B6B0 Zxda-201ENSMUST00000117281 2621 ntBASIC19.5■□□□□ 0.71
Trav6d-7A0A075B6B0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6d-7A0A075B6B0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trav6d-7A0A075B6B0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.46■□□□□ 0.71
Trav6d-7A0A075B6B0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6d-7A0A075B6B0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6d-7A0A075B6B0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6d-7A0A075B6B0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-7A0A075B6B0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6d-7A0A075B6B0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6d-7A0A075B6B0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6d-7A0A075B6B0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav6d-7A0A075B6B0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav6d-7A0A075B6B0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-7A0A075B6B0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6d-7A0A075B6B0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trav6d-7A0A075B6B0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6d-7A0A075B6B0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-7A0A075B6B0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6d-7A0A075B6B0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6d-7A0A075B6B0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav6d-7A0A075B6B0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6d-7A0A075B6B0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6d-7A0A075B6B0 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.37■□□□□ 0.69
Trav6d-7A0A075B6B0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6d-7A0A075B6B0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6d-7A0A075B6B0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6d-7A0A075B6B0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6d-7A0A075B6B0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6d-7A0A075B6B0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav6d-7A0A075B6B0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6d-7A0A075B6B0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6d-7A0A075B6B0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms