Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav3-4A0A075B654 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3-4A0A075B654 Gm24109-201ENSMUST00000175489 103 ntBASIC17.32■□□□□ 0.36
Trav3-4A0A075B654 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav3-4A0A075B654 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav3-4A0A075B654 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav3-4A0A075B654 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-4A0A075B654 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.29■□□□□ 0.36
Trav3-4A0A075B654 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-4A0A075B654 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3-4A0A075B654 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav3-4A0A075B654 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.25■□□□□ 0.35
Trav3-4A0A075B654 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav3-4A0A075B654 Gm23366-201ENSMUST00000175022 89 ntBASIC17.24■□□□□ 0.35
Trav3-4A0A075B654 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav3-4A0A075B654 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.22■□□□□ 0.35
Trav3-4A0A075B654 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-4A0A075B654 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav3-4A0A075B654 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.2■□□□□ 0.34
Trav3-4A0A075B654 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-4A0A075B654 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-4A0A075B654 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Trav3-4A0A075B654 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-4A0A075B654 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav3-4A0A075B654 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-4A0A075B654 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-4A0A075B654 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-4A0A075B654 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-4A0A075B654 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-4A0A075B654 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav3-4A0A075B654 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav3-4A0A075B654 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-4A0A075B654 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-4A0A075B654 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-4A0A075B654 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trav3-4A0A075B654 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-4A0A075B654 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-4A0A075B654 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-4A0A075B654 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-4A0A075B654 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.12■□□□□ 0.33
Trav3-4A0A075B654 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-4A0A075B654 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-4A0A075B654 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trav3-4A0A075B654 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trav3-4A0A075B654 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-4A0A075B654 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-4A0A075B654 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-4A0A075B654 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-4A0A075B654 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3-4A0A075B654 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3-4A0A075B654 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3-4A0A075B654 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-4A0A075B654 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trav3-4A0A075B654 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav3-4A0A075B654 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3-4A0A075B654 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav3-4A0A075B654 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Trav3-4A0A075B654 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav3-4A0A075B654 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-4A0A075B654 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-4A0A075B654 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3-4A0A075B654 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-4A0A075B654 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-4A0A075B654 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-4A0A075B654 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav3-4A0A075B654 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-4A0A075B654 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav3-4A0A075B654 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav3-4A0A075B654 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.97■□□□□ 0.31
Trav3-4A0A075B654 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-4A0A075B654 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-4A0A075B654 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav3-4A0A075B654 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav3-4A0A075B654 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3-4A0A075B654 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3-4A0A075B654 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-4A0A075B654 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-4A0A075B654 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3-4A0A075B654 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trav3-4A0A075B654 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trav3-4A0A075B654 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3-4A0A075B654 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms