Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9n-4A0A075B631 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9n-4A0A075B631 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9n-4A0A075B631 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.63■□□□□ 0.41
Trav9n-4A0A075B631 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9n-4A0A075B631 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav9n-4A0A075B631 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9n-4A0A075B631 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav9n-4A0A075B631 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav9n-4A0A075B631 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9n-4A0A075B631 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9n-4A0A075B631 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9n-4A0A075B631 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9n-4A0A075B631 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9n-4A0A075B631 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-4A0A075B631 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav9n-4A0A075B631 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9n-4A0A075B631 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9n-4A0A075B631 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9n-4A0A075B631 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9n-4A0A075B631 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9n-4A0A075B631 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.51■□□□□ 0.39
Trav9n-4A0A075B631 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9n-4A0A075B631 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav9n-4A0A075B631 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9n-4A0A075B631 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9n-4A0A075B631 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav9n-4A0A075B631 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav9n-4A0A075B631 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav9n-4A0A075B631 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9n-4A0A075B631 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9n-4A0A075B631 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav9n-4A0A075B631 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.44■□□□□ 0.38
Trav9n-4A0A075B631 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9n-4A0A075B631 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9n-4A0A075B631 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9n-4A0A075B631 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9n-4A0A075B631 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trav9n-4A0A075B631 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-4A0A075B631 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9n-4A0A075B631 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9n-4A0A075B631 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9n-4A0A075B631 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.4■□□□□ 0.38
Trav9n-4A0A075B631 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9n-4A0A075B631 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Trav9n-4A0A075B631 Gm27322-201ENSMUST00000184007 104 ntBASIC17.39■□□□□ 0.37
Trav9n-4A0A075B631 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9n-4A0A075B631 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav9n-4A0A075B631 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.38■□□□□ 0.37
Trav9n-4A0A075B631 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9n-4A0A075B631 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9n-4A0A075B631 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav9n-4A0A075B631 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.36■□□□□ 0.37
Trav9n-4A0A075B631 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav9n-4A0A075B631 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9n-4A0A075B631 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9n-4A0A075B631 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9n-4A0A075B631 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav9n-4A0A075B631 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9n-4A0A075B631 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9n-4A0A075B631 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Trav9n-4A0A075B631 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9n-4A0A075B631 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9n-4A0A075B631 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-4A0A075B631 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9n-4A0A075B631 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Trav9n-4A0A075B631 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-4A0A075B631 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-4A0A075B631 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-4A0A075B631 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9n-4A0A075B631 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9n-4A0A075B631 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9n-4A0A075B631 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9n-4A0A075B631 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9n-4A0A075B631 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav9n-4A0A075B631 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9n-4A0A075B631 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-4A0A075B631 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-4A0A075B631 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9n-4A0A075B631 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-4A0A075B631 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9n-4A0A075B631 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav9n-4A0A075B631 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9n-4A0A075B631 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9n-4A0A075B631 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9n-4A0A075B631 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-4A0A075B631 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9n-4A0A075B631 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav9n-4A0A075B631 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-4A0A075B631 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-4A0A075B631 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-4A0A075B631 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9n-4A0A075B631 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Trav9n-4A0A075B631 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav9n-4A0A075B631 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9n-4A0A075B631 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9n-4A0A075B631 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.14■□□□□ 0.34
Trav9n-4A0A075B631 Zxda-201ENSMUST00000117281 2621 ntBASIC17.14■□□□□ 0.33
Trav9n-4A0A075B631 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9n-4A0A075B631 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms