Protein–RNA interactions for Protein: A0A075B5M4

Igkv4-57-1, Immunoglobulin kappa variable 4-57-1 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-57-1A0A075B5M4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-57-1A0A075B5M4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.86■□□□□ 0.77
Igkv4-57-1A0A075B5M4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv4-57-1A0A075B5M4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Igkv4-57-1A0A075B5M4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Gm26115-201ENSMUST00000175605 87 ntBASIC19.82■□□□□ 0.76
Igkv4-57-1A0A075B5M4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.82■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv4-57-1A0A075B5M4 Gm8109-201ENSMUST00000194076 746 ntBASIC19.76■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Igkv4-57-1A0A075B5M4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv4-57-1A0A075B5M4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.6■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Igkv4-57-1A0A075B5M4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.55■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv4-57-1A0A075B5M4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.52■□□□□ 0.72
Igkv4-57-1A0A075B5M4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv4-57-1A0A075B5M4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.46■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv4-57-1A0A075B5M4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.44■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.4■□□□□ 0.7
Igkv4-57-1A0A075B5M4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.38■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Peli2-204ENSMUST00000226513 1320 ntBASIC19.37■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.36■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-57-1A0A075B5M4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.33■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Gm24804-201ENSMUST00000174982 85 ntBASIC19.27■□□□□ 0.68
Igkv4-57-1A0A075B5M4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Igkv4-57-1A0A075B5M4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.25■□□□□ 0.67
Igkv4-57-1A0A075B5M4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms