Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.92■□□□□ 0.46
Cldn13Q9Z0S4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn13Q9Z0S4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Gm9847-201ENSMUST00000052528 599 ntBASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn13Q9Z0S4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cldn13Q9Z0S4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn13Q9Z0S4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Gm12922-201ENSMUST00000120626 809 ntBASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn13Q9Z0S4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn13Q9Z0S4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn13Q9Z0S4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn13Q9Z0S4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms