Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Smc4Q8CG47 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Smc4Q8CG47 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.88■■□□□ 1.57
Smc4Q8CG47 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Smc4Q8CG47 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smc4Q8CG47 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Smc4Q8CG47 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smc4Q8CG47 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smc4Q8CG47 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Smc4Q8CG47 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Smc4Q8CG47 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Smc4Q8CG47 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Smc4Q8CG47 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Smc4Q8CG47 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Smc4Q8CG47 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.84■■□□□ 1.57
Smc4Q8CG47 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.84■■□□□ 1.57
Smc4Q8CG47 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Smc4Q8CG47 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Smc4Q8CG47 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.83■■□□□ 1.57
Smc4Q8CG47 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Smc4Q8CG47 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Smc4Q8CG47 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smc4Q8CG47 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.8■■□□□ 1.56
Smc4Q8CG47 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Smc4Q8CG47 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smc4Q8CG47 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Gm26833-201ENSMUST00000180899 440 ntBASIC24.78■■□□□ 1.56
Smc4Q8CG47 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.78■■□□□ 1.56
Smc4Q8CG47 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Smc4Q8CG47 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
Smc4Q8CG47 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc4Q8CG47 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms