Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim4Q8C1Q6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim4Q8C1Q6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim4Q8C1Q6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim4Q8C1Q6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim4Q8C1Q6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim4Q8C1Q6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim4Q8C1Q6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim4Q8C1Q6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
Smim4Q8C1Q6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim4Q8C1Q6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.77■□□□□ 0.28
Smim4Q8C1Q6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim4Q8C1Q6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim4Q8C1Q6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smim4Q8C1Q6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim4Q8C1Q6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim4Q8C1Q6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smim4Q8C1Q6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.76■□□□□ 0.27
Smim4Q8C1Q6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim4Q8C1Q6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smim4Q8C1Q6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms