Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.42■□□□□ 0.86
Fam196aQ3USH1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam196aQ3USH1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.4■□□□□ 0.86
Fam196aQ3USH1 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam196aQ3USH1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Fam196aQ3USH1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Fam196aQ3USH1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam196aQ3USH1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam196aQ3USH1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Fam196aQ3USH1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Fam196aQ3USH1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Fam196aQ3USH1 Gm10812-201ENSMUST00000099864 546 ntBASIC20.39■□□□□ 0.85
Fam196aQ3USH1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fam196aQ3USH1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Fam196aQ3USH1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Mir6982-201ENSMUST00000184354 68 ntBASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Fam196aQ3USH1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam196aQ3USH1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Gm5408-201ENSMUST00000197998 747 ntBASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fam196aQ3USH1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam196aQ3USH1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Fam196aQ3USH1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.33■□□□□ 0.85
Fam196aQ3USH1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Fam196aQ3USH1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam196aQ3USH1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam196aQ3USH1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam196aQ3USH1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam196aQ3USH1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.3■□□□□ 0.84
Fam196aQ3USH1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms