Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn13Q9Z0S4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn13Q9Z0S4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn13Q9Z0S4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn13Q9Z0S4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Cldn13Q9Z0S4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn13Q9Z0S4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cldn13Q9Z0S4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn13Q9Z0S4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn13Q9Z0S4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn13Q9Z0S4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn13Q9Z0S4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms